Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MUC4Q99102 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MUC4Q99102 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.63□□□□□ -0.07
MUC4Q99102 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.63□□□□□ -0.07
MUC4Q99102 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.63□□□□□ -0.07
MUC4Q99102 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.63□□□□□ -0.07
MUC4Q99102 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.63□□□□□ -0.07
MUC4Q99102 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.63□□□□□ -0.07
MUC4Q99102 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MUC4Q99102 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MUC4Q99102 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MUC4Q99102 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.63□□□□□ -0.07
MUC4Q99102 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
MUC4Q99102 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.63□□□□□ -0.07
MUC4Q99102 CD99P1-205ENST00000527459 561 ntBASIC14.63□□□□□ -0.07
MUC4Q99102 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MUC4Q99102 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.63□□□□□ -0.07
MUC4Q99102 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.63□□□□□ -0.07
MUC4Q99102 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
MUC4Q99102 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.63□□□□□ -0.07
MUC4Q99102 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MUC4Q99102 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MUC4Q99102 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MUC4Q99102 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MUC4Q99102 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.62□□□□□ -0.07
MUC4Q99102 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MUC4Q99102 BX119927.1-201ENST00000636596 1552 ntBASIC14.62□□□□□ -0.07
MUC4Q99102 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
MUC4Q99102 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MUC4Q99102 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.62□□□□□ -0.07
MUC4Q99102 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.62□□□□□ -0.07
MUC4Q99102 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MUC4Q99102 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MUC4Q99102 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MUC4Q99102 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.62□□□□□ -0.07
MUC4Q99102 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MUC4Q99102 DPP3P2-201ENST00000416030 1696 ntBASIC14.62□□□□□ -0.07
MUC4Q99102 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MUC4Q99102 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.62□□□□□ -0.07
MUC4Q99102 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.61□□□□□ -0.07
MUC4Q99102 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
MUC4Q99102 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.61□□□□□ -0.07
MUC4Q99102 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.61□□□□□ -0.07
MUC4Q99102 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.61□□□□□ -0.07
MUC4Q99102 AL162412.1-201ENST00000567129 965 ntBASIC14.61□□□□□ -0.07
MUC4Q99102 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
MUC4Q99102 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
MUC4Q99102 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.61□□□□□ -0.07
MUC4Q99102 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.61□□□□□ -0.07
MUC4Q99102 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
MUC4Q99102 AC010536.3-201ENST00000620306 533 ntBASIC14.61□□□□□ -0.07
MUC4Q99102 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
MUC4Q99102 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.61□□□□□ -0.07
MUC4Q99102 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MUC4Q99102 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.61□□□□□ -0.07
MUC4Q99102 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.6□□□□□ -0.07
MUC4Q99102 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.6□□□□□ -0.07
MUC4Q99102 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
MUC4Q99102 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.6□□□□□ -0.07
MUC4Q99102 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.6□□□□□ -0.07
MUC4Q99102 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.6□□□□□ -0.07
MUC4Q99102 AL109923.1-201ENST00000618799 583 ntBASIC14.6□□□□□ -0.07
MUC4Q99102 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
MUC4Q99102 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
MUC4Q99102 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.6□□□□□ -0.07
MUC4Q99102 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 PTBP1P-201ENST00000554374 1601 ntBASIC14.6□□□□□ -0.07
MUC4Q99102 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
MUC4Q99102 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MUC4Q99102 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.6□□□□□ -0.07
MUC4Q99102 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.6□□□□□ -0.07
MUC4Q99102 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.6□□□□□ -0.07
MUC4Q99102 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
MUC4Q99102 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms