Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLCC1Q96S66 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCC1Q96S66 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 GABARAPL3-202ENST00000624044 1851 ntBASIC16.82■□□□□ 0.28
CLCC1Q96S66 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 AC027612.3-201ENST00000413684 1047 ntBASIC16.82■□□□□ 0.28
CLCC1Q96S66 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCC1Q96S66 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCC1Q96S66 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCC1Q96S66 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLCC1Q96S66 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 LINC02228-203ENST00000641970 1355 ntBASIC16.81■□□□□ 0.28
CLCC1Q96S66 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCC1Q96S66 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCC1Q96S66 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLCC1Q96S66 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.81■□□□□ 0.28
CLCC1Q96S66 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CLCC1Q96S66 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCC1Q96S66 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCC1Q96S66 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCC1Q96S66 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms