Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 Z82202.1-201ENST00000623446 1880 ntBASIC16.25■□□□□ 0.19
RAB40CQ96S21 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB40CQ96S21 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
RAB40CQ96S21 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.24■□□□□ 0.19
RAB40CQ96S21 AC106739.1-201ENST00000617035 715 ntBASIC16.24■□□□□ 0.19
RAB40CQ96S21 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RAB40CQ96S21 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB40CQ96S21 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40CQ96S21 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB40CQ96S21 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RAB40CQ96S21 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RAB40CQ96S21 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.23■□□□□ 0.19
RAB40CQ96S21 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40CQ96S21 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAB40CQ96S21 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB40CQ96S21 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB40CQ96S21 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 AC110285.6-201ENST00000617652 491 ntBASIC16.22■□□□□ 0.19
RAB40CQ96S21 AC120498.10-201ENST00000621827 505 ntBASIC16.22■□□□□ 0.19
RAB40CQ96S21 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB40CQ96S21 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40CQ96S21 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB40CQ96S21 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB40CQ96S21 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40CQ96S21 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40CQ96S21 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40CQ96S21 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40CQ96S21 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40CQ96S21 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40CQ96S21 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40CQ96S21 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40CQ96S21 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40CQ96S21 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms