Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 AC007375.3-201ENST00000600936 2314 ntBASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 MMP23A-201ENST00000234610 1017 ntBASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC46A1Q96NT5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 TMPOP1-202ENST00000424642 1267 ntBASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 AL355355.2-201ENST00000442321 338 ntBASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 AF186192.3-201ENST00000583427 947 ntBASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 AF106564.1-201ENST00000607058 2553 ntBASIC19.24■□□□□ 0.67
SLC46A1Q96NT5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 AL445228.2-201ENST00000605589 952 ntBASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 AL121829.2-201ENST00000620908 328 ntBASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC46A1Q96NT5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 KRT16P5-201ENST00000455284 522 ntBASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC46A1Q96NT5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms