Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CFAP54Q96N23 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CFAP54Q96N23 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFAP54Q96N23 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFAP54Q96N23 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFAP54Q96N23 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.8■□□□□ 0.76
CFAP54Q96N23 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CFAP54Q96N23 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CFAP54Q96N23 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.8■□□□□ 0.76
CFAP54Q96N23 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.8■□□□□ 0.76
CFAP54Q96N23 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CFAP54Q96N23 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.8■□□□□ 0.76
CFAP54Q96N23 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFAP54Q96N23 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFAP54Q96N23 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFAP54Q96N23 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CFAP54Q96N23 EGLN1P1-201ENST00000531623 762 ntBASIC19.79■□□□□ 0.76
CFAP54Q96N23 AP005242.2-201ENST00000580065 1175 ntBASIC19.79■□□□□ 0.76
CFAP54Q96N23 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.79■□□□□ 0.76
CFAP54Q96N23 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CFAP54Q96N23 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.79■□□□□ 0.76
CFAP54Q96N23 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.79■□□□□ 0.76
CFAP54Q96N23 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.79■□□□□ 0.76
CFAP54Q96N23 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.79■□□□□ 0.76
CFAP54Q96N23 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CFAP54Q96N23 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.79■□□□□ 0.76
CFAP54Q96N23 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 AC004264.1-201ENST00000608354 794 ntBASIC19.79■□□□□ 0.76
CFAP54Q96N23 AC011558.1-201ENST00000623459 338 ntBASIC19.79■□□□□ 0.76
CFAP54Q96N23 AC022898.2-201ENST00000616822 1312 ntBASIC19.79■□□□□ 0.76
CFAP54Q96N23 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFAP54Q96N23 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CFAP54Q96N23 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.78■□□□□ 0.76
CFAP54Q96N23 CKBP1-201ENST00000565489 1086 ntBASIC19.78■□□□□ 0.76
CFAP54Q96N23 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.78■□□□□ 0.76
CFAP54Q96N23 AL138966.2-201ENST00000621997 464 ntBASIC19.78■□□□□ 0.76
CFAP54Q96N23 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.78■□□□□ 0.76
CFAP54Q96N23 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFAP54Q96N23 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.77■□□□□ 0.76
CFAP54Q96N23 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.77■□□□□ 0.76
CFAP54Q96N23 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CFAP54Q96N23 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 AC080038.3-201ENST00000623346 1952 ntBASIC19.77■□□□□ 0.76
CFAP54Q96N23 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 MESTP1-201ENST00000404287 994 ntBASIC19.77■□□□□ 0.76
CFAP54Q96N23 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CFAP54Q96N23 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CFAP54Q96N23 AC111152.3-201ENST00000569699 673 ntBASIC19.77■□□□□ 0.75
CFAP54Q96N23 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.77■□□□□ 0.75
CFAP54Q96N23 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.77■□□□□ 0.75
CFAP54Q96N23 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CFAP54Q96N23 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.77■□□□□ 0.75
CFAP54Q96N23 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.76■□□□□ 0.75
CFAP54Q96N23 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CFAP54Q96N23 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CFAP54Q96N23 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CFAP54Q96N23 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.76■□□□□ 0.75
CFAP54Q96N23 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CFAP54Q96N23 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms