Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 HLA-G-202ENST00000376815 851 ntBASIC20.18■□□□□ 0.82
SIPA1Q96FS4 HLA-G-203ENST00000376818 1127 ntBASIC20.18■□□□□ 0.82
SIPA1Q96FS4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 AL121906.2-201ENST00000621597 723 ntBASIC20.18■□□□□ 0.82
SIPA1Q96FS4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SIPA1Q96FS4 NBPF21P-201ENST00000425093 1451 ntBASIC20.18■□□□□ 0.82
SIPA1Q96FS4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 KRT16P5-201ENST00000455284 522 ntBASIC20.17■□□□□ 0.82
SIPA1Q96FS4 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 LINC01023-201ENST00000606054 436 ntBASIC20.17■□□□□ 0.82
SIPA1Q96FS4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIPA1Q96FS4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIPA1Q96FS4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 HTR7P1-201ENST00000538670 1336 ntBASIC20.15■□□□□ 0.82
SIPA1Q96FS4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 PKD1P6-201ENST00000343738 4769 ntBASIC20.15■□□□□ 0.82
SIPA1Q96FS4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIPA1Q96FS4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SIPA1Q96FS4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
SIPA1Q96FS4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SIPA1Q96FS4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SIPA1Q96FS4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.14■□□□□ 0.81
SIPA1Q96FS4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms