Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPTSSAQ969W0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 MIR935-201ENST00000401179 91 ntBASIC17.57■□□□□ 0.4
SPTSSAQ969W0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 AC105020.6-201ENST00000621523 1217 ntBASIC17.57■□□□□ 0.4
SPTSSAQ969W0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTSSAQ969W0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 AC005181.1-201ENST00000604782 1256 ntBASIC17.56■□□□□ 0.4
SPTSSAQ969W0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 AC112907.3-201ENST00000577781 2400 ntBASIC17.56■□□□□ 0.4
SPTSSAQ969W0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
SPTSSAQ969W0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 CYP2T3P-201ENST00000601990 817 ntBASIC17.55■□□□□ 0.4
SPTSSAQ969W0 AL137784.2-201ENST00000607332 1000 ntBASIC17.55■□□□□ 0.4
SPTSSAQ969W0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 AL589743.5-201ENST00000616611 1050 ntBASIC17.55■□□□□ 0.4
SPTSSAQ969W0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTSSAQ969W0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.54■□□□□ 0.4
SPTSSAQ969W0 PCDHAC2-203ENST00000615316 3011 ntBASIC17.54■□□□□ 0.4
SPTSSAQ969W0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPTSSAQ969W0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.54■□□□□ 0.4
SPTSSAQ969W0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.54■□□□□ 0.4
SPTSSAQ969W0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPTSSAQ969W0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPTSSAQ969W0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPTSSAQ969W0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms