Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF34Q969K3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RNF34Q969K3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF34Q969K3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF34Q969K3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RNF34Q969K3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF34Q969K3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF34Q969K3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF34Q969K3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF34Q969K3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF34Q969K3 KRT18P6-201ENST00000555540 1265 ntBASIC20.97■□□□□ 0.95
RNF34Q969K3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RNF34Q969K3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF34Q969K3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF34Q969K3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF34Q969K3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RNF34Q969K3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RNF34Q969K3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF34Q969K3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF34Q969K3 AC138932.1-201ENST00000534164 6830 ntBASIC20.97■□□□□ 0.95
RNF34Q969K3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF34Q969K3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF34Q969K3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF34Q969K3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF34Q969K3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF34Q969K3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF34Q969K3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF34Q969K3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF34Q969K3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF34Q969K3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF34Q969K3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF34Q969K3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF34Q969K3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RNF34Q969K3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF34Q969K3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
RNF34Q969K3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF34Q969K3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RNF34Q969K3 AL157384.1-201ENST00000445995 2473 ntBASIC20.95■□□□□ 0.94
RNF34Q969K3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 AC092368.3-202ENST00000574180 1591 ntBASIC20.95■□□□□ 0.94
RNF34Q969K3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF34Q969K3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF34Q969K3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF34Q969K3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF34Q969K3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RNF34Q969K3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF34Q969K3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF34Q969K3 SMG8-203ENST00000578922 2178 ntBASIC20.95■□□□□ 0.94
RNF34Q969K3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF34Q969K3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF34Q969K3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF34Q969K3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RNF34Q969K3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RNF34Q969K3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF34Q969K3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.94■□□□□ 0.94
RNF34Q969K3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF34Q969K3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF34Q969K3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF34Q969K3 AP005212.1-201ENST00000581547 1997 ntBASIC20.94■□□□□ 0.94
RNF34Q969K3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF34Q969K3 AC092667.1-201ENST00000434301 2586 ntBASIC20.93■□□□□ 0.94
RNF34Q969K3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF34Q969K3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF34Q969K3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF34Q969K3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms