Protein–RNA interactions for Protein: Q92989

CLP1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1Q92989 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.46■■□□□ 1.03
CLP1Q92989 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLP1Q92989 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLP1Q92989 TERF1P1-201ENST00000311003 1181 ntBASIC21.46■■□□□ 1.03
CLP1Q92989 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLP1Q92989 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.46■■□□□ 1.03
CLP1Q92989 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.46■■□□□ 1.03
CLP1Q92989 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLP1Q92989 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.46■■□□□ 1.03
CLP1Q92989 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.46■■□□□ 1.03
CLP1Q92989 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.46■■□□□ 1.03
CLP1Q92989 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.46■■□□□ 1.03
CLP1Q92989 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.46■■□□□ 1.03
CLP1Q92989 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.46■■□□□ 1.03
CLP1Q92989 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLP1Q92989 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLP1Q92989 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CLP1Q92989 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.45■■□□□ 1.02
CLP1Q92989 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CLP1Q92989 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CLP1Q92989 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLP1Q92989 PTBP1P-201ENST00000554374 1601 ntBASIC21.45■■□□□ 1.02
CLP1Q92989 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLP1Q92989 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CLP1Q92989 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.45■■□□□ 1.02
CLP1Q92989 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.45■■□□□ 1.02
CLP1Q92989 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLP1Q92989 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.45■■□□□ 1.02
CLP1Q92989 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.45■■□□□ 1.02
CLP1Q92989 CR392000.1-201ENST00000624770 1228 ntBASIC21.45■■□□□ 1.02
CLP1Q92989 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLP1Q92989 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.45■■□□□ 1.02
CLP1Q92989 KRT16P1-201ENST00000399124 1418 ntBASIC21.45■■□□□ 1.02
CLP1Q92989 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLP1Q92989 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
CLP1Q92989 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.44■■□□□ 1.02
CLP1Q92989 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.44■■□□□ 1.02
CLP1Q92989 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLP1Q92989 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.44■■□□□ 1.02
CLP1Q92989 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLP1Q92989 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 AL390955.1-201ENST00000428694 934 ntBASIC21.44■■□□□ 1.02
CLP1Q92989 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.44■■□□□ 1.02
CLP1Q92989 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.44■■□□□ 1.02
CLP1Q92989 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.44■■□□□ 1.02
CLP1Q92989 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLP1Q92989 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.44■■□□□ 1.02
CLP1Q92989 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.44■■□□□ 1.02
CLP1Q92989 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.44■■□□□ 1.02
CLP1Q92989 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.44■■□□□ 1.02
CLP1Q92989 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CLP1Q92989 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLP1Q92989 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLP1Q92989 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
CLP1Q92989 AC233723.2-201ENST00000623798 2106 ntBASIC21.43■■□□□ 1.02
CLP1Q92989 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLP1Q92989 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLP1Q92989 HLA-G-202ENST00000376815 851 ntBASIC21.43■■□□□ 1.02
CLP1Q92989 HLA-G-203ENST00000376818 1127 ntBASIC21.43■■□□□ 1.02
CLP1Q92989 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.43■■□□□ 1.02
CLP1Q92989 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.43■■□□□ 1.02
CLP1Q92989 KRT18P57-201ENST00000443599 1254 ntBASIC21.43■■□□□ 1.02
CLP1Q92989 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLP1Q92989 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLP1Q92989 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLP1Q92989 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.43■■□□□ 1.02
CLP1Q92989 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLP1Q92989 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.43■■□□□ 1.02
CLP1Q92989 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLP1Q92989 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLP1Q92989 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.42■■□□□ 1.02
CLP1Q92989 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLP1Q92989 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLP1Q92989 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLP1Q92989 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
CLP1Q92989 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLP1Q92989 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLP1Q92989 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.42■■□□□ 1.02
CLP1Q92989 AL137013.1-201ENST00000432946 1228 ntBASIC21.42■■□□□ 1.02
CLP1Q92989 SLC25A3P1-201ENST00000443844 931 ntBASIC21.42■■□□□ 1.02
CLP1Q92989 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.42■■□□□ 1.02
CLP1Q92989 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLP1Q92989 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
CLP1Q92989 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.42■■□□□ 1.02
CLP1Q92989 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLP1Q92989 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.42■■□□□ 1.02
CLP1Q92989 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLP1Q92989 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLP1Q92989 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLP1Q92989 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLP1Q92989 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.41■■□□□ 1.02
CLP1Q92989 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLP1Q92989 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms