Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC44A1Q8WWI5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 ZNRF2P3-201ENST00000424200 374 ntBASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.08■□□□□ 0.81
SLC44A1Q8WWI5 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.08■□□□□ 0.8
SLC44A1Q8WWI5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC44A1Q8WWI5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC44A1Q8WWI5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC44A1Q8WWI5 AC009237.14-201ENST00000609975 1594 ntBASIC20.08■□□□□ 0.8
SLC44A1Q8WWI5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC44A1Q8WWI5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC44A1Q8WWI5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC44A1Q8WWI5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 TNXA-203ENST00000507684 2038 ntBASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 UBE2DNL-204ENST00000602536 740 ntBASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC44A1Q8WWI5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 PTBP1P-201ENST00000554374 1601 ntBASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 KRT19P1-201ENST00000405746 1186 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms