Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 MYC-209ENST00000641252 345 ntBASIC20.31■□□□□ 0.84
PTCD2Q8WV60 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 DUSP5P2-201ENST00000426873 1033 ntBASIC20.3■□□□□ 0.84
PTCD2Q8WV60 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCD2Q8WV60 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 ABHD17AP1-201ENST00000358206 933 ntBASIC20.29■□□□□ 0.84
PTCD2Q8WV60 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 AC091874.3-201ENST00000512672 1195 ntBASIC20.29■□□□□ 0.84
PTCD2Q8WV60 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCD2Q8WV60 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTCD2Q8WV60 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 TSPY20P-201ENST00000450910 630 ntBASIC20.27■□□□□ 0.84
PTCD2Q8WV60 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms