Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 PKD1P1-201ENST00000458669 6805 ntBASIC20.58■□□□□ 0.89
PAF1Q8N7H5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.58■□□□□ 0.89
PAF1Q8N7H5 AC069152.1-201ENST00000438030 544 ntBASIC20.58■□□□□ 0.89
PAF1Q8N7H5 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.58■□□□□ 0.89
PAF1Q8N7H5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 AC092118.2-201ENST00000613495 667 ntBASIC20.58■□□□□ 0.89
PAF1Q8N7H5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.58■□□□□ 0.88
PAF1Q8N7H5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PAF1Q8N7H5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PAF1Q8N7H5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 DUSP5P2-201ENST00000426873 1033 ntBASIC20.57■□□□□ 0.88
PAF1Q8N7H5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 AC097658.1-201ENST00000475555 843 ntBASIC20.57■□□□□ 0.88
PAF1Q8N7H5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 AC098934.4-201ENST00000564127 592 ntBASIC20.57■□□□□ 0.88
PAF1Q8N7H5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 AC105020.6-201ENST00000621523 1217 ntBASIC20.57■□□□□ 0.88
PAF1Q8N7H5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PAF1Q8N7H5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.56■□□□□ 0.88
PAF1Q8N7H5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 AC142086.2-201ENST00000569753 217 ntBASIC20.55■□□□□ 0.88
PAF1Q8N7H5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PAF1Q8N7H5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms