Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 AC120498.10-201ENST00000621827 505 ntBASIC16.6■□□□□ 0.25
COMMD1Q8N668 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
COMMD1Q8N668 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD1Q8N668 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 AC008175.2-201ENST00000612840 297 ntBASIC16.59■□□□□ 0.25
COMMD1Q8N668 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COMMD1Q8N668 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD1Q8N668 AC099778.1-201ENST00000568593 1911 ntBASIC16.58■□□□□ 0.25
COMMD1Q8N668 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.58■□□□□ 0.25
COMMD1Q8N668 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD1Q8N668 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD1Q8N668 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD1Q8N668 AC112907.3-201ENST00000577781 2400 ntBASIC16.58■□□□□ 0.25
COMMD1Q8N668 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.58■□□□□ 0.24
COMMD1Q8N668 AC080038.1-201ENST00000611274 1154 ntBASIC16.58■□□□□ 0.24
COMMD1Q8N668 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
COMMD1Q8N668 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
COMMD1Q8N668 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.58■□□□□ 0.24
COMMD1Q8N668 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.58■□□□□ 0.24
COMMD1Q8N668 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COMMD1Q8N668 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD1Q8N668 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD1Q8N668 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
COMMD1Q8N668 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COMMD1Q8N668 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.57■□□□□ 0.24
COMMD1Q8N668 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COMMD1Q8N668 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.57■□□□□ 0.24
COMMD1Q8N668 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD1Q8N668 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms