Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO39Q8N4B4 AL162377.1-201ENST00000618844 1793 ntBASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 LSM12P1-201ENST00000411836 588 ntBASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.03■□□□□ 0.8
FBXO39Q8N4B4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 GCSHP5-201ENST00000443090 522 ntBASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 MIR2861-201ENST00000636310 90 ntBASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO39Q8N4B4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
FBXO39Q8N4B4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
FBXO39Q8N4B4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FBXO39Q8N4B4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FBXO39Q8N4B4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.02■□□□□ 0.79
FBXO39Q8N4B4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
FBXO39Q8N4B4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FBXO39Q8N4B4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 AL158047.1-201ENST00000445918 881 ntBASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 AC128676.1-201ENST00000454392 318 ntBASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 AC142381.4-202ENST00000563973 229 ntBASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO39Q8N4B4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
FBXO39Q8N4B4 PCDHAC2-203ENST00000615316 3011 ntBASIC20■□□□□ 0.79
FBXO39Q8N4B4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO39Q8N4B4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO39Q8N4B4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO39Q8N4B4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
FBXO39Q8N4B4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
FBXO39Q8N4B4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20■□□□□ 0.79
FBXO39Q8N4B4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20■□□□□ 0.79
FBXO39Q8N4B4 AC091799.1-201ENST00000422823 811 ntBASIC20■□□□□ 0.79
FBXO39Q8N4B4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20■□□□□ 0.79
FBXO39Q8N4B4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20■□□□□ 0.79
FBXO39Q8N4B4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20■□□□□ 0.79
FBXO39Q8N4B4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20■□□□□ 0.79
FBXO39Q8N4B4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO39Q8N4B4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO39Q8N4B4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO39Q8N4B4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO39Q8N4B4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.99■□□□□ 0.79
FBXO39Q8N4B4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO39Q8N4B4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
FBXO39Q8N4B4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms