Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf40Q8IXQ3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 FAM201B-201ENST00000458407 597 ntBASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 AC008687.6-201ENST00000596318 630 ntBASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf40Q8IXQ3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 AL162377.1-201ENST00000618844 1793 ntBASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf40Q8IXQ3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 AC006058.3-201ENST00000606217 1069 ntBASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.53■□□□□ 0.56
C9orf40Q8IXQ3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms