Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.8■□□□□ 0.76
APLFQ8IW19 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APLFQ8IW19 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.8■□□□□ 0.76
APLFQ8IW19 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
APLFQ8IW19 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
APLFQ8IW19 TERF1P5-201ENST00000477545 1207 ntBASIC19.8■□□□□ 0.76
APLFQ8IW19 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APLFQ8IW19 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.8■□□□□ 0.76
APLFQ8IW19 MIR4758-201ENST00000577688 71 ntBASIC19.8■□□□□ 0.76
APLFQ8IW19 MIR4651-201ENST00000582622 73 ntBASIC19.8■□□□□ 0.76
APLFQ8IW19 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.8■□□□□ 0.76
APLFQ8IW19 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
APLFQ8IW19 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
APLFQ8IW19 AC073314.1-201ENST00000568729 2216 ntBASIC19.8■□□□□ 0.76
APLFQ8IW19 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APLFQ8IW19 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
APLFQ8IW19 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APLFQ8IW19 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APLFQ8IW19 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.79■□□□□ 0.76
APLFQ8IW19 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.79■□□□□ 0.76
APLFQ8IW19 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.79■□□□□ 0.76
APLFQ8IW19 AC007322.4-201ENST00000509611 723 ntBASIC19.79■□□□□ 0.76
APLFQ8IW19 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.79■□□□□ 0.76
APLFQ8IW19 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.79■□□□□ 0.76
APLFQ8IW19 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 EEF1DP3-203ENST00000566025 782 ntBASIC19.79■□□□□ 0.76
APLFQ8IW19 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
APLFQ8IW19 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.79■□□□□ 0.76
APLFQ8IW19 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.79■□□□□ 0.76
APLFQ8IW19 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.79■□□□□ 0.76
APLFQ8IW19 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APLFQ8IW19 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
APLFQ8IW19 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
APLFQ8IW19 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APLFQ8IW19 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APLFQ8IW19 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
APLFQ8IW19 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.78■□□□□ 0.76
APLFQ8IW19 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.78■□□□□ 0.76
APLFQ8IW19 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
APLFQ8IW19 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APLFQ8IW19 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APLFQ8IW19 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APLFQ8IW19 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.78■□□□□ 0.76
APLFQ8IW19 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.78■□□□□ 0.76
APLFQ8IW19 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.78■□□□□ 0.76
APLFQ8IW19 AC053503.5-201ENST00000601508 636 ntBASIC19.78■□□□□ 0.76
APLFQ8IW19 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.78■□□□□ 0.76
APLFQ8IW19 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.78■□□□□ 0.76
APLFQ8IW19 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.78■□□□□ 0.76
APLFQ8IW19 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APLFQ8IW19 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.78■□□□□ 0.76
APLFQ8IW19 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.78■□□□□ 0.76
APLFQ8IW19 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.78■□□□□ 0.76
APLFQ8IW19 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
APLFQ8IW19 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 OR7E47P-201ENST00000546390 1422 ntBASIC19.77■□□□□ 0.76
APLFQ8IW19 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
APLFQ8IW19 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
APLFQ8IW19 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
APLFQ8IW19 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.77■□□□□ 0.76
APLFQ8IW19 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.77■□□□□ 0.76
APLFQ8IW19 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APLFQ8IW19 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.77■□□□□ 0.76
APLFQ8IW19 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
APLFQ8IW19 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
APLFQ8IW19 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
APLFQ8IW19 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 AC068338.2-201ENST00000563278 1430 ntBASIC19.76■□□□□ 0.75
APLFQ8IW19 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.76■□□□□ 0.75
APLFQ8IW19 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
APLFQ8IW19 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.76■□□□□ 0.75
APLFQ8IW19 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.76■□□□□ 0.75
APLFQ8IW19 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APLFQ8IW19 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms