Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CYP2T3P-201ENST00000601990 817 ntBASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKL3Q8IVW4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 OR10C1-204ENST00000622521 1039 ntBASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL3Q8IVW4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.61■□□□□ 0.89
CDKL3Q8IVW4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 PTBP1P-201ENST00000554374 1601 ntBASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 AL691432.2-201ENST00000607222 2038 ntBASIC20.6■□□□□ 0.89
CDKL3Q8IVW4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 AL355472.2-201ENST00000422958 438 ntBASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 TMEM179-206ENST00000616017 1645 ntBASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
CDKL3Q8IVW4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms