Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 AC092437.1-201ENST00000624794 1048 ntBASIC14.32□□□□□ -0.12
NFE4Q86UQ8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 AC116562.4-201ENST00000641316 2276 ntBASIC14.32□□□□□ -0.12
NFE4Q86UQ8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFE4Q86UQ8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 AC055733.4-201ENST00000638462 1354 ntBASIC14.31□□□□□ -0.12
NFE4Q86UQ8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NFE4Q86UQ8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 KRT18P20-201ENST00000548986 1279 ntBASIC14.3□□□□□ -0.12
NFE4Q86UQ8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 AC104187.1-201ENST00000607510 612 ntBASIC14.3□□□□□ -0.12
NFE4Q86UQ8 AC080038.1-201ENST00000611274 1154 ntBASIC14.3□□□□□ -0.12
NFE4Q86UQ8 AC120498.10-201ENST00000621827 505 ntBASIC14.3□□□□□ -0.12
NFE4Q86UQ8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 TCF3P1-201ENST00000423021 1937 ntBASIC14.3□□□□□ -0.12
NFE4Q86UQ8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NFE4Q86UQ8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 FP700111.2-201ENST00000619190 1892 ntBASIC14.29□□□□□ -0.12
NFE4Q86UQ8 AC005082.1-201ENST00000413042 2259 ntBASIC14.29□□□□□ -0.12
NFE4Q86UQ8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFE4Q86UQ8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms