Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MT2A-205ENST00000567300 416 ntTSL 211.81□□□□□ -0.522e-16■■■□□ 16
LARP4Q71RC2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.263e-7■■■□□ 16
LARP4Q71RC2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.277e-39■■■□□ 16
LARP4Q71RC2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.63□□□□□ -0.077e-39■■■□□ 16
LARP4Q71RC2 RPS9-208ENST00000445961 944 ntTSL 512.88□□□□□ -0.357e-39■■■□□ 16
LARP4Q71RC2 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.81□□□□□ -0.367e-39■■■□□ 16
LARP4Q71RC2 RPS9-212ENST00000495002 956 ntTSL 1 (best)12.27□□□□□ -0.457e-39■■■□□ 16
LARP4Q71RC2 SNHG5-205ENST00000427501 680 ntTSL 25.15□□□□□ -1.591e-8■■■□□ 16
LARP4Q71RC2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.711e-6■■■□□ 16
LARP4Q71RC2 AURKA-207ENST00000395914 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.491e-6■■■□□ 16
LARP4Q71RC2 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.181e-6■■■□□ 16
LARP4Q71RC2 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.191e-6■■■□□ 16
LARP4Q71RC2 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.231e-6■■■□□ 16
LARP4Q71RC2 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.271e-6■■■□□ 16
LARP4Q71RC2 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.341e-6■■■□□ 16
LARP4Q71RC2 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.362e-6■■■□□ 16
LARP4Q71RC2 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.382e-6■■■□□ 16
LARP4Q71RC2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.221e-6■■■□□ 16
LARP4Q71RC2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.04□□□□□ -0.325e-10■■■□□ 16
LARP4Q71RC2 CSTB-202ENST00000480147 2344 nt21.07■□□□□ 0.966e-9■■■□□ 16
LARP4Q71RC2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.41■□□□□ 0.386e-9■■■□□ 16
LARP4Q71RC2 CSTB-203ENST00000639959 1855 ntTSL 515.82■□□□□ 0.126e-9■■■□□ 16
LARP4Q71RC2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.096e-9■■■□□ 16
LARP4Q71RC2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.8■■□□□ 1.088e-8■■■□□ 16
LARP4Q71RC2 FKBP1B-204ENST00000438630 1137 ntTSL 1 (best)15.06■□□□□ 08e-8■■■□□ 16
LARP4Q71RC2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.038e-8■■■□□ 16
LARP4Q71RC2 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.29□□□□□ -0.448e-8■■■□□ 16
LARP4Q71RC2 FKBP1B-206ENST00000496149 1601 ntTSL 511.87□□□□□ -0.518e-8■■■□□ 16
LARP4Q71RC2 FKBP1B-203ENST00000421839 859 ntTSL 210.01□□□□□ -0.818e-8■■■□□ 16
LARP4Q71RC2 MFSD2B-203ENST00000453731 674 ntTSL 39.83□□□□□ -0.848e-8■■■□□ 16
LARP4Q71RC2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.836e-7■■■□□ 16
LARP4Q71RC2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.686e-7■■■□□ 16
LARP4Q71RC2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.456e-7■■■□□ 16
LARP4Q71RC2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.97□□□□□ -0.176e-7■■■□□ 16
LARP4Q71RC2 ATP5O-208ENST00000491703 2839 ntTSL 213.99□□□□□ -0.171e-6■■■□□ 16
LARP4Q71RC2 ATP5O-205ENST00000431254 583 ntTSL 28.76□□□□□ -1.011e-6■■■□□ 16
LARP4Q71RC2 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.041e-6■■■□□ 16
LARP4Q71RC2 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.061e-6■■■□□ 16
LARP4Q71RC2 CHID1-216ENST00000529539 602 ntTSL 219.42■□□□□ 0.72e-6■■■□□ 16
LARP4Q71RC2 CHID1-206ENST00000524538 553 ntTSL 219.42■□□□□ 0.72e-6■■■□□ 16
LARP4Q71RC2 CHID1-220ENST00000532909 619 ntTSL 519.03■□□□□ 0.642e-6■■■□□ 16
LARP4Q71RC2 CHID1-223ENST00000534207 1171 ntTSL 516.98■□□□□ 0.312e-6■■■□□ 16
LARP4Q71RC2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.242e-6■■■□□ 16
LARP4Q71RC2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.162e-6■■■□□ 16
LARP4Q71RC2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.17■□□□□ 0.022e-6■■■□□ 16
LARP4Q71RC2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.56□□□□□ -0.42e-6■■■□□ 16
LARP4Q71RC2 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC12.39□□□□□ -0.432e-6■■■□□ 16
LARP4Q71RC2 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.572e-6■■■□□ 16
LARP4Q71RC2 ALG8-208ENST00000526737 1674 ntTSL 514.54□□□□□ -0.086e-7■■■□□ 16
LARP4Q71RC2 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.56□□□□□ -0.246e-7■■■□□ 16
LARP4Q71RC2 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.496e-7■■■□□ 16
LARP4Q71RC2 ALG8-218ENST00000532306 844 ntTSL 58.77□□□□□ -1.016e-7■■■□□ 16
LARP4Q71RC2 ALG8-214ENST00000530608 714 ntTSL 37.28□□□□□ -1.246e-7■■■□□ 16
LARP4Q71RC2 ALG8-209ENST00000526849 612 ntTSL 26.59□□□□□ -1.356e-7■■■□□ 16
LARP4Q71RC2 ALG8-216ENST00000531213 517 ntTSL 26.07□□□□□ -1.446e-7■■■□□ 16
LARP4Q71RC2 ALG8-206ENST00000525783 493 ntTSL 36.04□□□□□ -1.446e-7■■■□□ 16
LARP4Q71RC2 GLDC-204ENST00000477960 762 ntTSL 38.43□□□□□ -1.067e-15■■■□□ 15.9
LARP4Q71RC2 RPS6-201ENST00000315377 863 ntTSL 3 BASIC10.9□□□□□ -0.662e-18■■■□□ 15.9
LARP4Q71RC2 CTSA-207ENST00000484855 2183 ntTSL 1 (best)16.4■□□□□ 0.221e-10■■■□□ 15.9
LARP4Q71RC2 ATXN2L-221ENST00000566946 2162 ntTSL 1 (best)20.04■□□□□ 0.81e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-208ENST00000562583 1933 ntTSL 1 (best)17.14■□□□□ 0.331e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-222ENST00000567024 525 ntTSL 316.07■□□□□ 0.161e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-213ENST00000564162 770 ntTSL 515.79■□□□□ 0.121e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)14.88□□□□□ -0.031e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.081e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.111e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-211ENST00000563314 4574 ntTSL 514.14□□□□□ -0.151e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.311e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.311e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.361e-17■■■□□ 15.9
LARP4Q71RC2 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.451e-17■■■□□ 15.9
LARP4Q71RC2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.138e-19■■■□□ 15.9
LARP4Q71RC2 CFAP20-203ENST00000562622 1605 ntTSL 513.61□□□□□ -0.238e-8■■■□□ 15.9
LARP4Q71RC2 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.598e-8■■■□□ 15.9
LARP4Q71RC2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.89■□□□□ 0.611e-6■■■□□ 15.9
LARP4Q71RC2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.571e-6■■■□□ 15.9
LARP4Q71RC2 IFRD2-203ENST00000426499 664 ntTSL 512.22□□□□□ -0.451e-6■■■□□ 15.9
LARP4Q71RC2 HINT2-203ENST00000471774 443 ntTSL 36.47□□□□□ -1.376e-6■■■□□ 15.9
LARP4Q71RC2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.441e-6■■■□□ 15.9
LARP4Q71RC2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.71■□□□□ 0.111e-6■■■□□ 15.9
LARP4Q71RC2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.234e-9■■■□□ 15.9
LARP4Q71RC2 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.514e-9■■■□□ 15.9
LARP4Q71RC2 RPL35A-208ENST00000485439 677 ntTSL 27.09□□□□□ -1.272e-18■■■□□ 15.9
LARP4Q71RC2 RPL35A-209ENST00000496582 579 ntTSL 26.43□□□□□ -1.382e-18■■■□□ 15.9
LARP4Q71RC2 RPL35A-202ENST00000429437 442 ntTSL 55.91□□□□□ -1.464e-9■■■□□ 15.9
LARP4Q71RC2 RPL35A-201ENST00000329092 456 ntTSL 35.04□□□□□ -1.62e-18■■■□□ 15.9
LARP4Q71RC2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.591e-6■■■□□ 15.9
LARP4Q71RC2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.73■□□□□ 0.591e-6■■■□□ 15.9
LARP4Q71RC2 NAPA-215ENST00000597271 1467 ntTSL 217.2■□□□□ 0.341e-6■■■□□ 15.9
LARP4Q71RC2 NAPA-205ENST00000594001 1417 ntTSL 215.44■□□□□ 0.061e-6■■■□□ 15.9
LARP4Q71RC2 AC073548.1-201ENST00000624088 1882 ntBASIC14.23□□□□□ -0.131e-6■■■□□ 15.9
LARP4Q71RC2 NAPA-217ENST00000597778 3898 ntTSL 211.37□□□□□ -0.591e-6■■■□□ 15.9
LARP4Q71RC2 NAPA-207ENST00000594217 554 ntTSL 58.55□□□□□ -1.041e-6■■■□□ 15.9
LARP4Q71RC2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.95□□□□□ -1.628e-8■■■□□ 15.9
LARP4Q71RC2 C20orf24-207ENST00000494506 874 ntTSL 27.78□□□□□ -1.161e-7■■■□□ 15.9
LARP4Q71RC2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.077e-21■■■□□ 15.9
LARP4Q71RC2 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.767e-21■■■□□ 15.9
LARP4Q71RC2 UBE2I-217ENST00000568209 266 ntTSL 516.43■□□□□ 0.224e-6■■■□□ 15.9
LARP4Q71RC2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.28e-8■■■□□ 15.9
LARP4Q71RC2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.434e-6■■■□□ 15.9
Retrieved 100 of 15,922 protein–RNA pairs in 306.6 ms