Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 KRT18P11-201ENST00000435214 1283 ntBASIC20.43■□□□□ 0.86
CASC4Q6P4E1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.43■□□□□ 0.86
CASC4Q6P4E1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 AL356652.1-201ENST00000615962 565 ntBASIC20.42■□□□□ 0.86
CASC4Q6P4E1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.42■□□□□ 0.86
CASC4Q6P4E1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 AC016769.1-201ENST00000409132 1010 ntBASIC20.41■□□□□ 0.86
CASC4Q6P4E1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 AC013268.1-206ENST00000638368 961 ntBASIC20.41■□□□□ 0.86
CASC4Q6P4E1 AC112229.1-201ENST00000639295 961 ntBASIC20.41■□□□□ 0.86
CASC4Q6P4E1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASC4Q6P4E1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 AC087633.2-202ENST00000565166 1439 ntBASIC20.4■□□□□ 0.86
CASC4Q6P4E1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASC4Q6P4E1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASC4Q6P4E1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASC4Q6P4E1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms