Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 MYC-209ENST00000641252 345 ntBASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA1Q5Y7H0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 DPP3P2-201ENST00000416030 1696 ntBASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA1Q5Y7H0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 AL390719.1-204ENST00000412397 1219 ntBASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA1Q5Y7H0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC020907.5-201ENST00000624372 1936 ntBASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC083880.1-201ENST00000608266 535 ntBASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 FEM1AP1-201ENST00000431297 1995 ntBASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
HLA-DQA1Q5Y7H0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA1Q5Y7H0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms