Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 MIPEPP3-201ENST00000412105 444 ntBASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KHDC1Q4VXA5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 KRT17P1-201ENST00000399211 1546 ntBASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 AC112907.3-201ENST00000577781 2400 ntBASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 SMG8-203ENST00000578922 2178 ntBASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 AL355802.2-201ENST00000402069 882 ntBASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KHDC1Q4VXA5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
KHDC1Q4VXA5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KHDC1Q4VXA5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
KHDC1Q4VXA5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
KHDC1Q4VXA5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KHDC1Q4VXA5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 AC027702.1-201ENST00000563810 1770 ntBASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 SLC29A4P1-201ENST00000398760 971 ntBASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 BX276092.2-201ENST00000417668 665 ntBASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 AC142086.2-201ENST00000569753 217 ntBASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 CYP2T3P-201ENST00000601990 817 ntBASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 AC100791.3-201ENST00000617619 330 ntBASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 AC006128.1-201ENST00000624704 1661 ntBASIC20.26■□□□□ 0.83
KHDC1Q4VXA5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 MCRIP2P1-201ENST00000394346 511 ntBASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.25■□□□□ 0.83
KHDC1Q4VXA5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms