Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 AL133373.2-201ENST00000623187 2828 ntBASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC6LQ2NKX8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 PCDHB18P-201ENST00000524813 2368 ntBASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 TSPY9P-201ENST00000440215 945 ntBASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 TSPY11P-201ENST00000442607 1045 ntBASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 AC020763.4-201ENST00000623414 4170 ntBASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC6LQ2NKX8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.99
ERCC6LQ2NKX8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
ERCC6LQ2NKX8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 AP005435.1-201ENST00000529293 1178 ntBASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 SMUG1P1-201ENST00000590640 811 ntBASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 AC009113.1-201ENST00000570267 2443 ntBASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC6LQ2NKX8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 BX119927.1-201ENST00000636596 1552 ntBASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 MIR2861-201ENST00000636310 90 ntBASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 CROCCP3-202ENST00000420820 1947 ntBASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.19■□□□□ 0.98
ERCC6LQ2NKX8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.18■□□□□ 0.98
ERCC6LQ2NKX8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms