Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 AL031985.4-201ENST00000642138 673 ntBASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 AC092053.2-201ENST00000640557 1818 ntBASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 AC069148.1-201ENST00000608741 768 ntBASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RSPO4Q2I0M5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 COX11P1-201ENST00000489116 835 ntBASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 AL138966.2-201ENST00000621997 464 ntBASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.54■□□□□ 0.72
RSPO4Q2I0M5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 FDX1P1-201ENST00000449115 551 ntBASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO4Q2I0M5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 MESTP1-201ENST00000404287 994 ntBASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO4Q2I0M5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RSPO4Q2I0M5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RSPO4Q2I0M5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 AC097488.1-201ENST00000507834 756 ntBASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 AC004263.2-201ENST00000617183 678 ntBASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO4Q2I0M5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms