Protein–RNA interactions for Protein: Q06696

VPS36, Vacuolar protein-sorting-associated protein 36, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS36Q06696 YBR131C-AYBR131C-A 90 nt1.98□□□□□ -2.09
VPS36Q06696 SPO21YOL091W 1830 nt1.98□□□□□ -2.09
VPS36Q06696 CUL3YGR003W 2235 nt1.98□□□□□ -2.09
VPS36Q06696 NOC3YLR002C 1992 nt1.98□□□□□ -2.09
VPS36Q06696 BRE1YDL074C 2103 nt1.97□□□□□ -2.09
VPS36Q06696 YDR182W-AYDR182W-A 204 nt1.97□□□□□ -2.09
VPS36Q06696 YJL120WYJL120W 324 nt1.97□□□□□ -2.09
VPS36Q06696 YBR174CYBR174C 315 nt1.97□□□□□ -2.09
VPS36Q06696 PTP2YOR208W 2253 nt1.97□□□□□ -2.09
VPS36Q06696 SEC63YOR254C 1992 nt1.96□□□□□ -2.1
VPS36Q06696 KOG1YHR186C 4674 nt1.96□□□□□ -2.1
VPS36Q06696 YNL170WYNL170W 396 nt1.96□□□□□ -2.1
VPS36Q06696 YOR343W-BYOR343W-B 5313 nt1.95□□□□□ -2.1
VPS36Q06696 YOR072W-BYOR072W-B 162 nt1.95□□□□□ -2.1
VPS36Q06696 LRE1YCL051W 1752 nt1.95□□□□□ -2.1
VPS36Q06696 YLL007CYLL007C 1998 nt1.94□□□□□ -2.1
VPS36Q06696 YLR035C-AYLR035C-A 3468 nt1.94□□□□□ -2.1
VPS36Q06696 ECM12YHR021W-A 456 nt1.94□□□□□ -2.1
VPS36Q06696 RPL31AYDL075W 342 nt1.92□□□□□ -2.1
VPS36Q06696 ULI1YFR026C 510 nt1.92□□□□□ -2.1
VPS36Q06696 MSH6YDR097C 3729 nt1.91□□□□□ -2.1
VPS36Q06696 SEC31YDL195W 3822 nt1.91□□□□□ -2.1
VPS36Q06696 SDH6YDR379C-A 240 nt1.91□□□□□ -2.1
VPS36Q06696 UBR2YLR024C 5619 nt1.91□□□□□ -2.1
VPS36Q06696 YNL144CYNL144C 2223 nt1.91□□□□□ -2.1
VPS36Q06696 HIR3YJR140C 4947 nt1.9□□□□□ -2.1
VPS36Q06696 SFB2YNL049C 2631 nt1.9□□□□□ -2.11
VPS36Q06696 YHR214C-BYHR214C-B 5382 nt1.89□□□□□ -2.11
VPS36Q06696 FKS1YLR342W 5631 nt1.89□□□□□ -2.11
VPS36Q06696 COF1YLL050C 432 nt1.89□□□□□ -2.11
VPS36Q06696 YMR175W-AYMR175W-A 195 nt1.89□□□□□ -2.11
VPS36Q06696 IRC20YLR247C 4671 nt1.88□□□□□ -2.11
VPS36Q06696 UTP21YLR409C 2820 nt1.88□□□□□ -2.11
VPS36Q06696 MYO4YAL029C 4416 nt1.88□□□□□ -2.11
VPS36Q06696 SLI15YBR156C 2097 nt1.88□□□□□ -2.11
VPS36Q06696 snR52snR52 92 nt1.88□□□□□ -2.11
VPS36Q06696 LHS1YKL073W 2646 nt1.88□□□□□ -2.11
VPS36Q06696 ATG9YDL149W 2994 nt1.88□□□□□ -2.11
VPS36Q06696 PBY1YBR094W 2262 nt1.87□□□□□ -2.11
VPS36Q06696 PAU3YCR104W 375 nt1.87□□□□□ -2.11
VPS36Q06696 Q0143Q0143 153 nt1.87□□□□□ -2.11
VPS36Q06696 YMR247W-AYMR247W-A 144 nt1.87□□□□□ -2.11
VPS36Q06696 YOR345CYOR345C 351 nt1.87□□□□□ -2.11
VPS36Q06696 YOR381W-AYOR381W-A 168 nt1.87□□□□□ -2.11
VPS36Q06696 PIP2YOR363C 2991 nt1.87□□□□□ -2.11
VPS36Q06696 PKH2YOL100W 3246 nt1.86□□□□□ -2.11
VPS36Q06696 HSL1YKL101W 4557 nt1.86□□□□□ -2.11
VPS36Q06696 ALK1YGL021W 2283 nt1.86□□□□□ -2.11
VPS36Q06696 PDR8YLR266C 2106 nt1.85□□□□□ -2.11
VPS36Q06696 COG4YPR105C 2586 nt1.85□□□□□ -2.11
VPS36Q06696 tT(UGU)HtT(UGU)H 72 nt1.85□□□□□ -2.11
VPS36Q06696 NCA2YPR155C 1851 nt1.85□□□□□ -2.11
VPS36Q06696 AIM44YPL158C 2277 nt1.84□□□□□ -2.11
VPS36Q06696 MGA2YIR033W 3342 nt1.84□□□□□ -2.11
VPS36Q06696 YGR164WYGR164W 336 nt1.84□□□□□ -2.11
VPS36Q06696 TMA7YLR262C-A 195 nt1.84□□□□□ -2.11
VPS36Q06696 RPL33BYOR234C 324 nt1.84□□□□□ -2.11
VPS36Q06696 PMP1YCR024C-A 123 nt1.83□□□□□ -2.12
VPS36Q06696 YDL196WYDL196W 330 nt1.83□□□□□ -2.12
VPS36Q06696 YDR521WYDR521W 336 nt1.83□□□□□ -2.12
VPS36Q06696 YHR210CYHR210C 1026 nt1.83□□□□□ -2.12
VPS36Q06696 YLL019W-AYLL019W-A 93 nt1.83□□□□□ -2.12
VPS36Q06696 YOR161W-BYOR161W-B 261 nt1.83□□□□□ -2.12
VPS36Q06696 SLD3YGL113W 2007 nt1.83□□□□□ -2.12
VPS36Q06696 HAL9YOL089C 3093 nt1.82□□□□□ -2.12
VPS36Q06696 SBE22YHR103W 2559 nt1.81□□□□□ -2.12
VPS36Q06696 PEP1YBL017C 4740 nt1.81□□□□□ -2.12
VPS36Q06696 IFH1YLR223C 3258 nt1.81□□□□□ -2.12
VPS36Q06696 SPO24YPR036W-A 204 nt1.81□□□□□ -2.12
VPS36Q06696 YOR093CYOR093C 4947 nt1.81□□□□□ -2.12
VPS36Q06696 YJR039WYJR039W 3366 nt1.81□□□□□ -2.12
VPS36Q06696 AHC1YOR023C 1701 nt1.8□□□□□ -2.12
VPS36Q06696 YER172C-AYER172C-A 381 nt1.8□□□□□ -2.12
VPS36Q06696 TRM3YDL112W 4311 nt1.8□□□□□ -2.12
VPS36Q06696 COY1YKL179C 2040 nt1.79□□□□□ -2.12
VPS36Q06696 FIG2YCR089W 4830 nt1.79□□□□□ -2.12
VPS36Q06696 ADR1YDR216W 3972 nt1.79□□□□□ -2.12
VPS36Q06696 FIG4YNL325C 2640 nt1.79□□□□□ -2.12
VPS36Q06696 YEL073CYEL073C 324 nt1.79□□□□□ -2.12
VPS36Q06696 EMC5YIL027C 426 nt1.79□□□□□ -2.12
VPS36Q06696 VPS15YBR097W 4365 nt1.79□□□□□ -2.12
VPS36Q06696 GYP5YPL249C 2685 nt1.79□□□□□ -2.12
VPS36Q06696 NUT1YGL151W 3399 nt1.79□□□□□ -2.12
VPS36Q06696 RTP1YMR185W 2946 nt1.76□□□□□ -2.13
VPS36Q06696 YBR206WYBR206W 324 nt1.76□□□□□ -2.13
VPS36Q06696 RAD50YNL250W 3939 nt1.75□□□□□ -2.13
VPS36Q06696 YBL053WYBL053W 375 nt1.75□□□□□ -2.13
VPS36Q06696 PRP42YDR235W 1635 nt1.74□□□□□ -2.13
VPS36Q06696 KIP1YBL063W 3336 nt1.74□□□□□ -2.13
VPS36Q06696 SKI3YPR189W 4299 nt1.74□□□□□ -2.13
VPS36Q06696 YIL134C-AYIL134C-A 204 nt1.73□□□□□ -2.13
VPS36Q06696 ALY2YJL084C 3141 nt1.73□□□□□ -2.13
VPS36Q06696 UFD2YDL190C 2886 nt1.73□□□□□ -2.13
VPS36Q06696 MYO2YOR326W 4725 nt1.72□□□□□ -2.13
VPS36Q06696 YIL020C-AYIL020C-A 339 nt1.72□□□□□ -2.13
VPS36Q06696 YDL206WYDL206W 2289 nt1.71□□□□□ -2.14
VPS36Q06696 MMS4YBR098W 2076 nt1.71□□□□□ -2.14
VPS36Q06696 YGR109W-BYGR109W-B 4644 nt1.71□□□□□ -2.14
VPS36Q06696 YLL054CYLL054C 2532 nt1.7□□□□□ -2.14
VPS36Q06696 YDR354C-AYDR354C-A 144 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms