Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
USP46P62068 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.12■□□□□ 0.97
USP46P62068 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.12■□□□□ 0.97
USP46P62068 AC023632.3-201ENST00000521633 145 ntBASIC21.12■□□□□ 0.97
USP46P62068 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.12■□□□□ 0.97
USP46P62068 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.12■□□□□ 0.97
USP46P62068 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.12■□□□□ 0.97
USP46P62068 MTDHP1-201ENST00000605323 784 ntBASIC21.12■□□□□ 0.97
USP46P62068 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
USP46P62068 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.12■□□□□ 0.97
USP46P62068 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.12■□□□□ 0.97
USP46P62068 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.12■□□□□ 0.97
USP46P62068 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.12■□□□□ 0.97
USP46P62068 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.11■□□□□ 0.97
USP46P62068 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
USP46P62068 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.11■□□□□ 0.97
USP46P62068 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.11■□□□□ 0.97
USP46P62068 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.11■□□□□ 0.97
USP46P62068 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.11■□□□□ 0.97
USP46P62068 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.11■□□□□ 0.97
USP46P62068 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.11■□□□□ 0.97
USP46P62068 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.11■□□□□ 0.97
USP46P62068 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.11■□□□□ 0.97
USP46P62068 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
USP46P62068 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.11■□□□□ 0.97
USP46P62068 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.11■□□□□ 0.97
USP46P62068 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP46P62068 AC124283.5-201ENST00000624661 1809 ntBASIC21.11■□□□□ 0.97
USP46P62068 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.1■□□□□ 0.97
USP46P62068 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
USP46P62068 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.1■□□□□ 0.97
USP46P62068 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.1■□□□□ 0.97
USP46P62068 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
USP46P62068 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.1■□□□□ 0.97
USP46P62068 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP46P62068 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.1■□□□□ 0.97
USP46P62068 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.09■□□□□ 0.97
USP46P62068 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USP46P62068 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.09■□□□□ 0.97
USP46P62068 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.09■□□□□ 0.97
USP46P62068 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.09■□□□□ 0.97
USP46P62068 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.09■□□□□ 0.97
USP46P62068 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.09■□□□□ 0.97
USP46P62068 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.09■□□□□ 0.97
USP46P62068 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USP46P62068 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.09■□□□□ 0.97
USP46P62068 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
USP46P62068 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
USP46P62068 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP46P62068 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
USP46P62068 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
USP46P62068 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 PKD1P6-201ENST00000343738 4769 ntBASIC21.08■□□□□ 0.97
USP46P62068 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
USP46P62068 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USP46P62068 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms