Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.05■□□□□ -0
FOXA3P55318 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.05■□□□□ -0
FOXA3P55318 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
FOXA3P55318 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 SYT6-210ENST00000641643 1587 ntBASIC15.05■□□□□ -0
FOXA3P55318 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.05■□□□□ -0
FOXA3P55318 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
FOXA3P55318 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 Z82202.1-201ENST00000623446 1880 ntBASIC15.05■□□□□ -0
FOXA3P55318 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.05■□□□□ -0
FOXA3P55318 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.05■□□□□ -0
FOXA3P55318 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.05■□□□□ -0
FOXA3P55318 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FOXA3P55318 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.04■□□□□ -0
FOXA3P55318 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.04■□□□□ -0
FOXA3P55318 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.04■□□□□ -0
FOXA3P55318 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.04■□□□□ -0
FOXA3P55318 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.04■□□□□ -0
FOXA3P55318 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.04■□□□□ -0
FOXA3P55318 AL138724.1-201ENST00000606771 1088 ntBASIC15.04■□□□□ -0
FOXA3P55318 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.04■□□□□ -0
FOXA3P55318 FZD10-202ENST00000539839 3282 ntBASIC15.04■□□□□ -0
FOXA3P55318 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
FOXA3P55318 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 AC093503.3-201ENST00000624917 2352 ntBASIC15.04■□□□□ -0
FOXA3P55318 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FOXA3P55318 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.03■□□□□ -0
FOXA3P55318 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.03■□□□□ -0
FOXA3P55318 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.03■□□□□ -0
FOXA3P55318 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.03■□□□□ -0
FOXA3P55318 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.03■□□□□ -0
FOXA3P55318 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 HTR7P1-202ENST00000624664 4411 ntBASIC15.03■□□□□ -0
FOXA3P55318 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FOXA3P55318 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.03■□□□□ -0
FOXA3P55318 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.03■□□□□ -0
FOXA3P55318 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 TREX1-205ENST00000625293 1783 ntBASIC15.03■□□□□ -0
FOXA3P55318 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FOXA3P55318 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FOXA3P55318 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.03■□□□□ -0
FOXA3P55318 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXA3P55318 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.02■□□□□ -0
FOXA3P55318 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
FOXA3P55318 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.02■□□□□ -0
FOXA3P55318 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
FOXA3P55318 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.02■□□□□ -0
FOXA3P55318 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXA3P55318 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
FOXA3P55318 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXA3P55318 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.02■□□□□ -0
FOXA3P55318 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.02■□□□□ -0
FOXA3P55318 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms