Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.78■□□□□ 0.92
PTPN5P54829 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN5P54829 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PTPN5P54829 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN5P54829 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN5P54829 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PTPN5P54829 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PTPN5P54829 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN5P54829 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PTPN5P54829 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PTPN5P54829 AC245052.3-201ENST00000450182 901 ntBASIC20.77■□□□□ 0.92
PTPN5P54829 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN5P54829 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN5P54829 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PTPN5P54829 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN5P54829 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN5P54829 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN5P54829 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN5P54829 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN5P54829 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN5P54829 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN5P54829 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN5P54829 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN5P54829 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN5P54829 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN5P54829 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTPN5P54829 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.76■□□□□ 0.91
PTPN5P54829 NAPSB-206ENST00000562112 1266 ntBASIC20.76■□□□□ 0.91
PTPN5P54829 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN5P54829 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PTPN5P54829 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN5P54829 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN5P54829 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN5P54829 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTPN5P54829 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN5P54829 KRT8P9-201ENST00000558927 1449 ntBASIC20.76■□□□□ 0.91
PTPN5P54829 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN5P54829 AL024507.2-201ENST00000606070 2574 ntBASIC20.76■□□□□ 0.91
PTPN5P54829 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN5P54829 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PTPN5P54829 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PTPN5P54829 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN5P54829 UNC93B2-201ENST00000285383 730 ntBASIC20.75■□□□□ 0.91
PTPN5P54829 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN5P54829 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN5P54829 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PTPN5P54829 KRT18P48-201ENST00000434763 852 ntBASIC20.75■□□□□ 0.91
PTPN5P54829 SLC25A3P1-201ENST00000443844 931 ntBASIC20.75■□□□□ 0.91
PTPN5P54829 RBM17P1-201ENST00000453646 1190 ntBASIC20.75■□□□□ 0.91
PTPN5P54829 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN5P54829 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN5P54829 WWOX-216ENST00000569818 525 ntBASIC20.75■□□□□ 0.91
PTPN5P54829 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN5P54829 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN5P54829 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPN5P54829 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN5P54829 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PTPN5P54829 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN5P54829 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN5P54829 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPN5P54829 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN5P54829 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
PTPN5P54829 AL353807.1-201ENST00000427475 662 ntBASIC20.74■□□□□ 0.91
PTPN5P54829 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
PTPN5P54829 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPN5P54829 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPN5P54829 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTPN5P54829 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 AF186192.3-201ENST00000583427 947 ntBASIC20.74■□□□□ 0.91
PTPN5P54829 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
PTPN5P54829 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPN5P54829 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PTPN5P54829 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PTPN5P54829 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN5P54829 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
PTPN5P54829 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTPN5P54829 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN5P54829 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms