Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CLNS1AP54105 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLNS1AP54105 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.91■□□□□ 0.78
CLNS1AP54105 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.91■□□□□ 0.78
CLNS1AP54105 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLNS1AP54105 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.91■□□□□ 0.78
CLNS1AP54105 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
CLNS1AP54105 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLNS1AP54105 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
CLNS1AP54105 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CLNS1AP54105 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLNS1AP54105 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.91■□□□□ 0.78
CLNS1AP54105 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.91■□□□□ 0.78
CLNS1AP54105 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLNS1AP54105 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLNS1AP54105 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLNS1AP54105 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CLNS1AP54105 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.91■□□□□ 0.78
CLNS1AP54105 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLNS1AP54105 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLNS1AP54105 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CLNS1AP54105 PLK5-205ENST00000642079 1969 ntBASIC19.9■□□□□ 0.78
CLNS1AP54105 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
CLNS1AP54105 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLNS1AP54105 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CLNS1AP54105 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CLNS1AP54105 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLNS1AP54105 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLNS1AP54105 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.9■□□□□ 0.78
CLNS1AP54105 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CLNS1AP54105 TSPY26P-201ENST00000476365 1326 ntBASIC19.9■□□□□ 0.78
CLNS1AP54105 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLNS1AP54105 BX005040.4-201ENST00000637145 1518 ntBASIC19.9■□□□□ 0.78
CLNS1AP54105 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.9■□□□□ 0.78
CLNS1AP54105 AC121338.2-201ENST00000622535 1744 ntBASIC19.9■□□□□ 0.78
CLNS1AP54105 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLNS1AP54105 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLNS1AP54105 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLNS1AP54105 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLNS1AP54105 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLNS1AP54105 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLNS1AP54105 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLNS1AP54105 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.89■□□□□ 0.77
CLNS1AP54105 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
CLNS1AP54105 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLNS1AP54105 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLNS1AP54105 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CLNS1AP54105 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.89■□□□□ 0.77
CLNS1AP54105 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLNS1AP54105 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLNS1AP54105 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLNS1AP54105 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.89■□□□□ 0.77
CLNS1AP54105 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.89■□□□□ 0.77
CLNS1AP54105 AC131212.1-201ENST00000613771 668 ntBASIC19.89■□□□□ 0.77
CLNS1AP54105 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLNS1AP54105 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLNS1AP54105 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 NOC2LP1-202ENST00000452600 2235 ntBASIC19.88■□□□□ 0.77
CLNS1AP54105 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.88■□□□□ 0.77
CLNS1AP54105 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLNS1AP54105 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.88■□□□□ 0.77
CLNS1AP54105 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CLNS1AP54105 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.88■□□□□ 0.77
CLNS1AP54105 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.88■□□□□ 0.77
CLNS1AP54105 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLNS1AP54105 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.88■□□□□ 0.77
CLNS1AP54105 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.88■□□□□ 0.77
CLNS1AP54105 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLNS1AP54105 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLNS1AP54105 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.87■□□□□ 0.77
CLNS1AP54105 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.87■□□□□ 0.77
CLNS1AP54105 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.87■□□□□ 0.77
CLNS1AP54105 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLNS1AP54105 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.87■□□□□ 0.77
CLNS1AP54105 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.87■□□□□ 0.77
CLNS1AP54105 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CLNS1AP54105 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLNS1AP54105 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CLNS1AP54105 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms