Protein–RNA interactions for Protein: P53064

RTF1, RNA polymerase-associated protein RTF1, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTF1P53064 PHO91YNR013C 2685 nt3.14□□□□□ -1.91
RTF1P53064 YAL067W-AYAL067W-A 228 nt3.14□□□□□ -1.91
RTF1P53064 GEA1YJR031C 4227 nt3.14□□□□□ -1.91
RTF1P53064 YJL026C-AYJL026C-A 222 nt3.13□□□□□ -1.91
RTF1P53064 YOR055WYOR055W 435 nt3.13□□□□□ -1.91
RTF1P53064 APL2YKL135C 2181 nt3.12□□□□□ -1.91
RTF1P53064 SRO77YBL106C 3033 nt3.12□□□□□ -1.91
RTF1P53064 IRC8YJL051W 2469 nt3.12□□□□□ -1.91
RTF1P53064 TTI1YKL033W 3117 nt3.12□□□□□ -1.91
RTF1P53064 SRB8YCR081W 4284 nt3.11□□□□□ -1.91
RTF1P53064 DCP2YNL118C 2913 nt3.11□□□□□ -1.91
RTF1P53064 NFT1YKR103W 3657 nt3.11□□□□□ -1.91
RTF1P53064 snR81snR81 201 nt3.11□□□□□ -1.91
RTF1P53064 QCR9YGR183C 201 nt3.11□□□□□ -1.91
RTF1P53064 YDR521WYDR521W 336 nt3.1□□□□□ -1.91
RTF1P53064 YGL182CYGL182C 324 nt3.1□□□□□ -1.91
RTF1P53064 YHR131W-AYHR131W-A 246 nt3.1□□□□□ -1.91
RTF1P53064 JSN1YJR091C 3276 nt3.1□□□□□ -1.91
RTF1P53064 MSB1YOR188W 3414 nt3.1□□□□□ -1.91
RTF1P53064 SAP190YKR028W 3102 nt3.1□□□□□ -1.91
RTF1P53064 INP51YIL002C 2841 nt3.09□□□□□ -1.91
RTF1P53064 CBF2YGR140W 2871 nt3.09□□□□□ -1.91
RTF1P53064 ARP8YOR141C 2646 nt3.09□□□□□ -1.91
RTF1P53064 ALK1YGL021W 2283 nt3.08□□□□□ -1.92
RTF1P53064 SEC63YOR254C 1992 nt3.07□□□□□ -1.92
RTF1P53064 FLO11YIR019C 4104 nt3.07□□□□□ -1.92
RTF1P53064 YKR075W-AYKR075W-A 270 nt3.07□□□□□ -1.92
RTF1P53064 YLR035C-AYLR035C-A 3468 nt3.07□□□□□ -1.92
RTF1P53064 YNL018CYNL018C 1839 nt3.07□□□□□ -1.92
RTF1P53064 STB6YKL072W 2301 nt3.05□□□□□ -1.92
RTF1P53064 LHS1YKL073W 2646 nt3.04□□□□□ -1.92
RTF1P53064 SCD5YOR329C 2619 nt3.04□□□□□ -1.92
RTF1P53064 MMS22YLR320W 4365 nt3.04□□□□□ -1.92
RTF1P53064 YGR109W-BYGR109W-B 4644 nt3.04□□□□□ -1.92
RTF1P53064 UBP1YDL122W 2430 nt3.03□□□□□ -1.92
RTF1P53064 MRD1YPR112C 2664 nt3.03□□□□□ -1.92
RTF1P53064 YHR086W-AYHR086W-A 162 nt3.03□□□□□ -1.92
RTF1P53064 snR39BsnR39B 96 nt3.03□□□□□ -1.92
RTF1P53064 MLH1YMR167W 2310 nt3.02□□□□□ -1.93
RTF1P53064 AMS1YGL156W 3252 nt3.02□□□□□ -1.93
RTF1P53064 snR62snR62 100 nt3.02□□□□□ -1.93
RTF1P53064 APL1YJR005W 2103 nt3.01□□□□□ -1.93
RTF1P53064 SAP1YER047C 2694 nt3□□□□□ -1.93
RTF1P53064 MAK10YEL053C 2202 nt3□□□□□ -1.93
RTF1P53064 MLH3YPL164C 2148 nt2.99□□□□□ -1.93
RTF1P53064 REV3YPL167C 4515 nt2.98□□□□□ -1.93
RTF1P53064 YDR209CYDR209C 414 nt2.97□□□□□ -1.93
RTF1P53064 UTP8YGR128C 2142 nt2.97□□□□□ -1.93
RTF1P53064 YLL020CYLL020C 306 nt2.97□□□□□ -1.93
RTF1P53064 TOR1YJR066W 7413 nt2.97□□□□□ -1.93
RTF1P53064 ISW1YBR245C 3390 nt2.97□□□□□ -1.93
RTF1P53064 PKH2YOL100W 3246 nt2.97□□□□□ -1.93
RTF1P53064 YAL037C-AYAL037C-A 93 nt2.96□□□□□ -1.94
RTF1P53064 YBL039C-AYBL039C-A 84 nt2.96□□□□□ -1.94
RTF1P53064 HMI1YOL095C 2121 nt2.96□□□□□ -1.94
RTF1P53064 LCL1YPL056C 306 nt2.95□□□□□ -1.94
RTF1P53064 UBP15YMR304W 3693 nt2.94□□□□□ -1.94
RTF1P53064 MSH5YDL154W 2706 nt2.94□□□□□ -1.94
RTF1P53064 MDS3YGL197W 4464 nt2.94□□□□□ -1.94
RTF1P53064 SAP185YJL098W 3177 nt2.92□□□□□ -1.94
RTF1P53064 BFR2YDR299W 1605 nt2.92□□□□□ -1.94
RTF1P53064 BNR1YIL159W 4128 nt2.92□□□□□ -1.94
RTF1P53064 VPS13YLL040C 9435 nt2.92□□□□□ -1.94
RTF1P53064 TOP2YNL088W 4287 nt2.91□□□□□ -1.94
RTF1P53064 COG4YPR105C 2586 nt2.91□□□□□ -1.94
RTF1P53064 VPS8YAL002W 3825 nt2.9□□□□□ -1.94
RTF1P53064 SVL3YPL032C 2478 nt2.9□□□□□ -1.95
RTF1P53064 YEF3YLR249W 3135 nt2.9□□□□□ -1.95
RTF1P53064 SLX4YLR135W 2247 nt2.89□□□□□ -1.95
RTF1P53064 YGL123C-AYGL123C-A 231 nt2.89□□□□□ -1.95
RTF1P53064 SLH1YGR271W 5904 nt2.88□□□□□ -1.95
RTF1P53064 RPL37BYDR500C 267 nt2.88□□□□□ -1.95
RTF1P53064 SGM1YJR134C 2124 nt2.87□□□□□ -1.95
RTF1P53064 UTP22YGR090W 3714 nt2.87□□□□□ -1.95
RTF1P53064 YMR175W-AYMR175W-A 195 nt2.87□□□□□ -1.95
RTF1P53064 PDR8YLR266C 2106 nt2.87□□□□□ -1.95
RTF1P53064 UBR1YGR184C 5853 nt2.86□□□□□ -1.95
RTF1P53064 BUD2YKL092C 3315 nt2.86□□□□□ -1.95
RTF1P53064 TRS130YMR218C 3309 nt2.86□□□□□ -1.95
RTF1P53064 RPS29AYLR388W 171 nt2.86□□□□□ -1.95
RTF1P53064 YDL206WYDL206W 2289 nt2.86□□□□□ -1.95
RTF1P53064 INO80YGL150C 4470 nt2.86□□□□□ -1.95
RTF1P53064 SLI15YBR156C 2097 nt2.86□□□□□ -1.95
RTF1P53064 MET18YIL128W 3099 nt2.86□□□□□ -1.95
RTF1P53064 NUP100YKL068W 2880 nt2.86□□□□□ -1.95
RTF1P53064 SEC16YPL085W 6588 nt2.85□□□□□ -1.95
RTF1P53064 YOR343W-BYOR343W-B 5313 nt2.85□□□□□ -1.95
RTF1P53064 TAH1YCR060W 336 nt2.85□□□□□ -1.95
RTF1P53064 tM(CAU)Q2tM(CAU)Q2 78 nt2.85□□□□□ -1.95
RTF1P53064 AGC1YPR021C 2709 nt2.85□□□□□ -1.95
RTF1P53064 IST2YBR086C 2841 nt2.85□□□□□ -1.95
RTF1P53064 COG6YNL041C 2520 nt2.84□□□□□ -1.95
RTF1P53064 UFD2YDL190C 2886 nt2.84□□□□□ -1.96
RTF1P53064 FAR11YNL127W 2862 nt2.84□□□□□ -1.96
RTF1P53064 EAF1YDR359C 2949 nt2.83□□□□□ -1.96
RTF1P53064 PSD2YGR170W 3417 nt2.83□□□□□ -1.96
RTF1P53064 CHC1YGL206C 4962 nt2.82□□□□□ -1.96
RTF1P53064 SSD1YDR293C 3753 nt2.82□□□□□ -1.96
RTF1P53064 YOR161W-AYOR161W-A 81 nt2.82□□□□□ -1.96
RTF1P53064 YBR072C-AYBR072C-A 162 nt2.82□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms