Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.61□□□□□ -1.995e-8■■■□□ 15.7
NCBP2P52298 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.032e-7■■■□□ 15.6
NCBP2P52298 SUN1-222ENST00000457861 2975 ntTSL 215.05■□□□□ 02e-7■■■□□ 15.6
NCBP2P52298 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.82■□□□□ 0.762e-7■■■□□ 15.6
NCBP2P52298 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.192e-7■■■□□ 15.6
NCBP2P52298 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.62□□□□□ -0.072e-7■■■□□ 15.6
NCBP2P52298 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.32□□□□□ -0.122e-7■■■□□ 15.6
NCBP2P52298 LEPROT-202ENST00000475108 492 ntTSL 319.71■□□□□ 0.753e-8■■■□□ 15.6
NCBP2P52298 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.453e-8■■■□□ 15.6
NCBP2P52298 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC11.06□□□□□ -0.643e-8■■■□□ 15.6
NCBP2P52298 LEPROT-204ENST00000488747 345 ntTSL 59.97□□□□□ -0.813e-8■■■□□ 15.6
NCBP2P52298 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.87□□□□□ -1.473e-8■■■□□ 15.6
NCBP2P52298 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.87□□□□□ -1.633e-8■■■□□ 15.6
NCBP2P52298 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.023e-8■■■□□ 15.6
NCBP2P52298 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.23■■□□□ 1.152e-10■■■□□ 15.6
NCBP2P52298 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.66■□□□□ 0.92e-10■■■□□ 15.6
NCBP2P52298 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.662e-10■■■□□ 15.6
NCBP2P52298 PYCR1-212ENST00000583564 377 ntTSL 318.56■□□□□ 0.562e-10■■■□□ 15.6
NCBP2P52298 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.29■□□□□ 0.522e-10■■■□□ 15.6
NCBP2P52298 PYCR1-209ENST00000579698 572 ntTSL 417.16■□□□□ 0.342e-10■■■□□ 15.6
NCBP2P52298 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.87■□□□□ 0.292e-10■■■□□ 15.6
NCBP2P52298 PYCR1-214ENST00000585215 767 ntTSL 415.3■□□□□ 0.042e-10■■■□□ 15.6
NCBP2P52298 PYCR1-206ENST00000577624 510 ntTSL 315.07■□□□□ 02e-10■■■□□ 15.6
NCBP2P52298 PYCR1-210ENST00000581271 528 ntTSL 415.06■□□□□ 02e-10■■■□□ 15.6
NCBP2P52298 PYCR1-205ENST00000405481 841 ntTSL 213.92□□□□□ -0.182e-10■■■□□ 15.6
NCBP2P52298 PYCR1-215ENST00000585244 578 ntTSL 412.92□□□□□ -0.342e-10■■■□□ 15.6
NCBP2P52298 PYCR1-211ENST00000582198 868 ntTSL 512.74□□□□□ -0.372e-10■■■□□ 15.6
NCBP2P52298 PYCR1-208ENST00000579366 681 ntTSL 310.06□□□□□ -0.82e-10■■■□□ 15.6
NCBP2P52298 SLC9A1-202ENST00000374084 695 ntTSL 57.82□□□□□ -1.162e-7■■■□□ 15.6
NCBP2P52298 ST3GAL6-206ENST00000466482 540 ntTSL 420.88■□□□□ 0.933e-8■■■□□ 15.6
NCBP2P52298 SPIRE2-209ENST00000566337 1369 ntTSL 520.81■□□□□ 0.922e-15■■■□□ 15.6
NCBP2P52298 AC098484.3-201ENST00000464081 825 ntAPPRIS ALT2 TSL 518.85■□□□□ 0.613e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-227ENST00000497621 2109 ntTSL 1 (best)18.67■□□□□ 0.583e-8■■■□□ 15.6
NCBP2P52298 SH3GLB2-204ENST00000416230 720 ntTSL 218.58■□□□□ 0.563e-8■■■□□ 15.6
NCBP2P52298 ACAP3-210ENST00000478065 2393 ntTSL 318.38■□□□□ 0.533e-8■■■□□ 15.6
NCBP2P52298 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.53e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-203ENST00000460774 582 ntTSL 318.03■□□□□ 0.483e-8■■■□□ 15.6
NCBP2P52298 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.423e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-204ENST00000462152 1102 ntTSL 217.11■□□□□ 0.333e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-226ENST00000497008 564 ntTSL 417.04■□□□□ 0.323e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-219ENST00000489112 804 ntTSL 316.7■□□□□ 0.263e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-213ENST00000480133 360 ntTSL 416.33■□□□□ 0.23e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.113e-8■■■□□ 15.6
NCBP2P52298 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.013e-8■■■□□ 15.6
NCBP2P52298 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.053e-8■■■□□ 15.6
NCBP2P52298 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.213e-8■■■□□ 15.6
NCBP2P52298 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.52□□□□□ -0.253e-8■■■□□ 15.6
NCBP2P52298 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.263e-8■■■□□ 15.6
NCBP2P52298 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.333e-8■■■□□ 15.6
NCBP2P52298 SLC6A8-207ENST00000466243 544 ntTSL 212.54□□□□□ -0.48e-12■■■□□ 15.6
NCBP2P52298 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC12.02□□□□□ -0.493e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.53e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-208ENST00000469105 2837 ntTSL 1 (best)11.73□□□□□ -0.533e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC11.65□□□□□ -0.543e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-217ENST00000486249 3148 ntTSL 211.04□□□□□ -0.643e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC9.47□□□□□ -0.893e-8■■■□□ 15.6
NCBP2P52298 ST3GAL6-218ENST00000486334 750 ntTSL 53.18□□□□□ -1.93e-8■■■□□ 15.6
NCBP2P52298 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.29■■□□□ 1.322e-7■■■□□ 15.6
NCBP2P52298 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.582e-7■■■□□ 15.6
NCBP2P52298 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.39□□□□□ -0.111e-6■■■□□ 15.6
NCBP2P52298 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.05□□□□□ -0.161e-6■■■□□ 15.6
NCBP2P52298 ARFIP1-208ENST00000510831 514 ntTSL 314□□□□□ -0.171e-6■■■□□ 15.6
NCBP2P52298 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.32□□□□□ -0.281e-6■■■□□ 15.6
NCBP2P52298 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.91e-6■■■□□ 15.6
NCBP2P52298 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91e-6■■■□□ 15.6
NCBP2P52298 KPNA4-202ENST00000469804 790 ntTSL 223.55■■□□□ 1.369e-9■■■□□ 15.6
NCBP2P52298 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.439e-9■■■□□ 15.6
NCBP2P52298 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.56□□□□□ -0.086e-8■■■□□ 15.6
NCBP2P52298 PNPLA3-202ENST00000406117 1480 ntTSL 213.99□□□□□ -0.176e-8■■■□□ 15.6
NCBP2P52298 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.186e-8■■■□□ 15.6
NCBP2P52298 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.583e-9■■■□□ 15.6
NCBP2P52298 FAM208B-205ENST00000473789 506 ntTSL 521.93■■□□□ 1.13e-6■■■□□ 15.6
NCBP2P52298 FAM208B-210ENST00000496681 522 ntTSL 321.45■■□□□ 1.023e-6■■■□□ 15.6
NCBP2P52298 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.183e-6■■■□□ 15.6
NCBP2P52298 FAM208B-206ENST00000477043 514 ntTSL 215.43■□□□□ 0.063e-6■■■□□ 15.6
NCBP2P52298 ENY2-215ENST00000523335 1540 ntTSL 216.45■□□□□ 0.221e-7■■■□□ 15.6
NCBP2P52298 ENY2-212ENST00000522407 541 ntTSL 415.17■□□□□ 0.021e-7■■■□□ 15.6
NCBP2P52298 ENY2-213ENST00000522632 587 ntTSL 213.48□□□□□ -0.251e-7■■■□□ 15.6
NCBP2P52298 ENY2-206ENST00000518584 566 ntTSL 213.04□□□□□ -0.321e-7■■■□□ 15.6
NCBP2P52298 ENY2-203ENST00000517350 2150 ntTSL 1 (best)12.62□□□□□ -0.391e-7■■■□□ 15.6
NCBP2P52298 ENY2-204ENST00000517756 445 ntTSL 510.03□□□□□ -0.81e-7■■■□□ 15.6
NCBP2P52298 ENY2-214ENST00000522766 567 ntTSL 49.92□□□□□ -0.821e-7■■■□□ 15.6
NCBP2P52298 ENY2-210ENST00000521662 562 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.821e-7■■■□□ 15.6
NCBP2P52298 ENY2-207ENST00000519754 561 ntTSL 49.86□□□□□ -0.831e-7■■■□□ 15.6
NCBP2P52298 ENY2-202ENST00000517311 2966 ntTSL 29.24□□□□□ -0.931e-7■■■□□ 15.6
NCBP2P52298 ENY2-208ENST00000520147 857 ntTSL 4 BASIC8.99□□□□□ -0.971e-7■■■□□ 15.6
NCBP2P52298 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.41□□□□□ -1.061e-7■■■□□ 15.6
NCBP2P52298 ENY2-201ENST00000339942 546 ntTSL 48.34□□□□□ -1.071e-7■■■□□ 15.6
NCBP2P52298 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.382e-10■■■□□ 15.6
NCBP2P52298 NUP85-202ENST00000449421 1287 ntTSL 211.89□□□□□ -0.512e-10■■■□□ 15.6
NCBP2P52298 NUP85-224ENST00000583948 1197 ntTSL 210.38□□□□□ -0.752e-10■■■□□ 15.6
NCBP2P52298 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC10.3□□□□□ -0.762e-10■■■□□ 15.6
NCBP2P52298 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC9.63□□□□□ -0.872e-10■■■□□ 15.6
NCBP2P52298 NUP85-216ENST00000581104 2233 ntTSL 28.8□□□□□ -12e-10■■■□□ 15.6
NCBP2P52298 NUP85-219ENST00000582833 453 ntTSL 58.1□□□□□ -1.112e-10■■■□□ 15.6
NCBP2P52298 NUP85-221ENST00000583548 562 ntTSL 55.39□□□□□ -1.552e-10■■■□□ 15.6
NCBP2P52298 NUP85-204ENST00000577208 572 ntTSL 43.85□□□□□ -1.792e-10■■■□□ 15.6
NCBP2P52298 NUP85-222ENST00000583569 553 ntTSL 52.71□□□□□ -1.982e-10■■■□□ 15.6
NCBP2P52298 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.051e-9■■■□□ 15.5
NCBP2P52298 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.112e-6■■■□□ 15.5
Retrieved 100 of 18,329 protein–RNA pairs in 43.3 ms