Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC12.71□□□□□ -0.38
UBE2AP49459 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC12.71□□□□□ -0.38
UBE2AP49459 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2AP49459 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2AP49459 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC12.7□□□□□ -0.38
UBE2AP49459 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.7□□□□□ -0.38
UBE2AP49459 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.7□□□□□ -0.38
UBE2AP49459 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
UBE2AP49459 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
UBE2AP49459 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC12.7□□□□□ -0.38
UBE2AP49459 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC12.7□□□□□ -0.38
UBE2AP49459 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC12.7□□□□□ -0.38
UBE2AP49459 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBE2AP49459 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2AP49459 AL391422.3-201ENST00000603791 2761 ntBASIC12.69□□□□□ -0.38
UBE2AP49459 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2AP49459 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.69□□□□□ -0.38
UBE2AP49459 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2AP49459 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2AP49459 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBE2AP49459 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2AP49459 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
UBE2AP49459 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
UBE2AP49459 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2AP49459 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2AP49459 AC034268.1-201ENST00000441047 882 ntBASIC12.69□□□□□ -0.38
UBE2AP49459 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 RARRES2P11-201ENST00000635158 484 ntBASIC12.69□□□□□ -0.38
UBE2AP49459 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
UBE2AP49459 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2AP49459 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2AP49459 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2AP49459 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2AP49459 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2AP49459 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2AP49459 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2AP49459 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.69□□□□□ -0.38
UBE2AP49459 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2AP49459 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2AP49459 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2AP49459 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2AP49459 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2AP49459 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 CDV3P1-201ENST00000471403 739 ntBASIC12.68□□□□□ -0.38
UBE2AP49459 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
UBE2AP49459 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.68□□□□□ -0.38
UBE2AP49459 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms