Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YGR130CYGR130C 2451 nt1.22□□□□□ -2.21
NDE1P40215 SLD3YGL113W 2007 nt1.22□□□□□ -2.21
NDE1P40215 YHL042WYHL042W 453 nt1.21□□□□□ -2.22
NDE1P40215 YOR293C-AYOR293C-A 150 nt1.21□□□□□ -2.22
NDE1P40215 CDC39YCR093W 6327 nt1.21□□□□□ -2.22
NDE1P40215 YLL007CYLL007C 1998 nt1.21□□□□□ -2.22
NDE1P40215 MDS3YGL197W 4464 nt1.21□□□□□ -2.22
NDE1P40215 WAR1YML076C 2835 nt1.21□□□□□ -2.22
NDE1P40215 IML1YJR138W 4755 nt1.2□□□□□ -2.22
NDE1P40215 YGR035CYGR035C 351 nt1.19□□□□□ -2.22
NDE1P40215 YAR053WYAR053W 297 nt1.19□□□□□ -2.22
NDE1P40215 BIL1YOR304C-A 231 nt1.18□□□□□ -2.22
NDE1P40215 SPO75YLL005C 2607 nt1.18□□□□□ -2.22
NDE1P40215 APL1YJR005W 2103 nt1.17□□□□□ -2.22
NDE1P40215 RPL33BYOR234C 324 nt1.17□□□□□ -2.22
NDE1P40215 KAP120YPL125W 3099 nt1.16□□□□□ -2.22
NDE1P40215 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
NDE1P40215 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
NDE1P40215 RPL34BYIL052C 366 nt1.15□□□□□ -2.23
NDE1P40215 YJR011CYJR011C 786 nt1.15□□□□□ -2.23
NDE1P40215 YDR169C-AYDR169C-A 150 nt1.14□□□□□ -2.23
NDE1P40215 YDR521WYDR521W 336 nt1.14□□□□□ -2.23
NDE1P40215 ISD11YER048W-A 285 nt1.14□□□□□ -2.23
NDE1P40215 SCC2YDR180W 4482 nt1.14□□□□□ -2.23
NDE1P40215 HMRA2YCR096C 360 nt1.13□□□□□ -2.23
NDE1P40215 YPR012WYPR012W 255 nt1.13□□□□□ -2.23
NDE1P40215 YPR170W-AYPR170W-A 186 nt1.13□□□□□ -2.23
NDE1P40215 SIP4YJL089W 2490 nt1.13□□□□□ -2.23
NDE1P40215 OST1YJL002C 1431 nt1.13□□□□□ -2.23
NDE1P40215 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
NDE1P40215 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
NDE1P40215 YDR118W-AYDR118W-A 117 nt1.11□□□□□ -2.23
NDE1P40215 HTB2YBL002W 396 nt1.11□□□□□ -2.23
NDE1P40215 CSN9YDR179C 489 nt1.1□□□□□ -2.23
NDE1P40215 YBL008W-AYBL008W-A 240 nt1.1□□□□□ -2.23
NDE1P40215 SMC1YFL008W 3678 nt1.1□□□□□ -2.23
NDE1P40215 SPT7YBR081C 3999 nt1.09□□□□□ -2.23
NDE1P40215 YOR282WYOR282W 321 nt1.09□□□□□ -2.23
NDE1P40215 TTI1YKL033W 3117 nt1.08□□□□□ -2.24
NDE1P40215 YHL046W-AYHL046W-A 327 nt1.07□□□□□ -2.24
NDE1P40215 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
NDE1P40215 YCK3YER123W 1575 nt1.06□□□□□ -2.24
NDE1P40215 YDL196WYDL196W 330 nt1.06□□□□□ -2.24
NDE1P40215 YAR029WYAR029W 225 nt1.05□□□□□ -2.24
NDE1P40215 YBR206WYBR206W 324 nt1.05□□□□□ -2.24
NDE1P40215 DBP6YNR038W 1890 nt1.05□□□□□ -2.24
NDE1P40215 RPL35AYDL191W 363 nt1.04□□□□□ -2.24
NDE1P40215 ALG13YGL047W 609 nt1.04□□□□□ -2.24
NDE1P40215 EMT1tM(CAU)D 73 nt1.04□□□□□ -2.24
NDE1P40215 EMT5tM(CAU)J1 73 nt1.04□□□□□ -2.24
NDE1P40215 EMT3tM(CAU)J2 73 nt1.04□□□□□ -2.24
NDE1P40215 EMT4tM(CAU)M 73 nt1.04□□□□□ -2.24
NDE1P40215 EMT2tM(CAU)O2 73 nt1.04□□□□□ -2.24
NDE1P40215 YHR007C-AYHR007C-A 216 nt1.04□□□□□ -2.24
NDE1P40215 YOR029WYOR029W 336 nt1.04□□□□□ -2.24
NDE1P40215 YLR334CYLR334C 381 nt1.03□□□□□ -2.24
NDE1P40215 LTE1YAL024C 4308 nt1.03□□□□□ -2.24
NDE1P40215 tW(UCA)QtW(UCA)Q 74 nt1.02□□□□□ -2.25
NDE1P40215 DOP1YDR141C 5097 nt1.01□□□□□ -2.25
NDE1P40215 SPO21YOL091W 1830 nt1.01□□□□□ -2.25
NDE1P40215 PAA1YDR071C 576 nt1.01□□□□□ -2.25
NDE1P40215 TAR1YLR154W-C 375 nt1.01□□□□□ -2.25
NDE1P40215 YPL044CYPL044C 549 nt1.01□□□□□ -2.25
NDE1P40215 YBR064WYBR064W 429 nt1□□□□□ -2.25
NDE1P40215 YPR117WYPR117W 7470 nt1□□□□□ -2.25
NDE1P40215 OLI1Q0130 231 nt0.99□□□□□ -2.25
NDE1P40215 RPS25BYLR333C 327 nt0.99□□□□□ -2.25
NDE1P40215 IES4YOR189W 351 nt0.99□□□□□ -2.25
NDE1P40215 PRP16YKR086W 3216 nt0.98□□□□□ -2.25
NDE1P40215 BEM2YER155C 6504 nt0.98□□□□□ -2.25
NDE1P40215 YMR321CYMR321C 318 nt0.98□□□□□ -2.25
NDE1P40215 NOP9YJL010C 2001 nt0.98□□□□□ -2.25
NDE1P40215 YDL073WYDL073W 2955 nt0.97□□□□□ -2.25
NDE1P40215 PMP1YCR024C-A 123 nt0.97□□□□□ -2.25
NDE1P40215 YJL120WYJL120W 324 nt0.97□□□□□ -2.25
NDE1P40215 YPR016W-AYPR016W-A 261 nt0.96□□□□□ -2.26
NDE1P40215 CMC4YMR194C-B 222 nt0.95□□□□□ -2.26
NDE1P40215 YOR011W-AYOR011W-A 207 nt0.95□□□□□ -2.26
NDE1P40215 YPL038W-AYPL038W-A 192 nt0.95□□□□□ -2.26
NDE1P40215 GEA2YEL022W 4380 nt0.94□□□□□ -2.26
NDE1P40215 YPR197CYPR197C 564 nt0.93□□□□□ -2.26
NDE1P40215 YDR048CYDR048C 315 nt0.92□□□□□ -2.26
NDE1P40215 RPL26BYGR034W 384 nt0.92□□□□□ -2.26
NDE1P40215 YHR063W-AYHR063W-A 336 nt0.92□□□□□ -2.26
NDE1P40215 STF2YGR008C 255 nt0.9□□□□□ -2.27
NDE1P40215 YPL225WYPL225W 441 nt0.9□□□□□ -2.27
NDE1P40215 MCM10YIL150C 1716 nt0.89□□□□□ -2.27
NDE1P40215 YDR344CYDR344C 444 nt0.89□□□□□ -2.27
NDE1P40215 SSS1YDR086C 243 nt0.88□□□□□ -2.27
NDE1P40215 BFR2YDR299W 1605 nt0.88□□□□□ -2.27
NDE1P40215 UBP3YER151C 2739 nt0.87□□□□□ -2.27
NDE1P40215 HTL1YCR020W-B 237 nt0.87□□□□□ -2.27
NDE1P40215 ECM12YHR021W-A 456 nt0.87□□□□□ -2.27
NDE1P40215 NHP2YDL208W 471 nt0.86□□□□□ -2.27
NDE1P40215 YDR102CYDR102C 333 nt0.86□□□□□ -2.27
NDE1P40215 HUG1YML058W-A 207 nt0.86□□□□□ -2.27
NDE1P40215 PAU24YBR301W 363 nt0.86□□□□□ -2.27
NDE1P40215 SEC1YDR164C 2175 nt0.86□□□□□ -2.27
NDE1P40215 SEC8YPR055W 3198 nt0.86□□□□□ -2.27
NDE1P40215 PAM16YJL104W 450 nt0.85□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 153 ms