Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.618e-12■■■■□ 24.7
U2AF2P26368 AZIN1-209ENST00000522311 872 ntTSL 34.53□□□□□ -1.688e-12■■■■□ 24.7
U2AF2P26368 AZIN1-208ENST00000521536 680 ntTSL 54.13□□□□□ -1.758e-12■■■■□ 24.7
U2AF2P26368 LARS-204ENST00000504323 608 ntTSL 310.62□□□□□ -0.713e-9■■■■□ 24.7
U2AF2P26368 LARS-210ENST00000508667 707 ntTSL 38.75□□□□□ -1.013e-9■■■■□ 24.7
U2AF2P26368 LARS-209ENST00000507095 384 ntTSL 36.91□□□□□ -1.33e-9■■■■□ 24.7
U2AF2P26368 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.82■■□□□ 1.243e-7■■■■□ 24.7
U2AF2P26368 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.333e-7■■■■□ 24.7
U2AF2P26368 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.363e-7■■■■□ 24.7
U2AF2P26368 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC11.65□□□□□ -0.544e-7■■■■□ 24.7
U2AF2P26368 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.624e-7■■■■□ 24.7
U2AF2P26368 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC10.61□□□□□ -0.714e-7■■■■□ 24.7
U2AF2P26368 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.012e-19■■■■□ 24.7
U2AF2P26368 PPP1R10-206ENST00000484449 605 ntTSL 54.47□□□□□ -1.692e-19■■■■□ 24.7
U2AF2P26368 PPP1R10-204ENST00000473954 470 ntTSL 34.01□□□□□ -1.771e-24■■■■□ 24.7
U2AF2P26368 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.656e-19■■■■□ 24.7
U2AF2P26368 S100PBP-207ENST00000482212 706 ntTSL 226.01■■□□□ 1.752e-7■■■■□ 24.7
U2AF2P26368 S100PBP-215ENST00000531123 1688 ntTSL 520.7■□□□□ 0.912e-7■■■■□ 24.7
U2AF2P26368 S100PBP-212ENST00000529027 429 ntTSL 318.16■□□□□ 0.52e-7■■■■□ 24.7
U2AF2P26368 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.192e-7■■■■□ 24.7
U2AF2P26368 S100PBP-202ENST00000373475 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.32e-7■■■■□ 24.7
U2AF2P26368 MARK3-226ENST00000561314 724 ntTSL 312.27□□□□□ -0.456e-14■■■■□ 24.7
U2AF2P26368 S100PBP-210ENST00000526230 573 ntTSL 411.85□□□□□ -0.512e-7■■■■□ 24.7
U2AF2P26368 S100PBP-201ENST00000356689 3583 ntTSL 1 (best)11.39□□□□□ -0.592e-7■■■■□ 24.7
U2AF2P26368 MARK3-211ENST00000556744 1051 ntTSL 1 (best)10.67□□□□□ -0.76e-14■■■■□ 24.7
U2AF2P26368 S100PBP-214ENST00000530710 725 ntTSL 410.57□□□□□ -0.722e-7■■■■□ 24.7
U2AF2P26368 S100PBP-216ENST00000531256 551 ntTSL 48.98□□□□□ -0.972e-7■■■■□ 24.7
U2AF2P26368 S100PBP-213ENST00000530552 551 ntTSL 23.62□□□□□ -1.832e-7■■■■□ 24.7
U2AF2P26368 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.96□□□□□ -1.464e-6■■■■□ 24.7
U2AF2P26368 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.72□□□□□ -1.494e-6■■■■□ 24.7
U2AF2P26368 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.78□□□□□ -1.644e-6■■■■□ 24.7
U2AF2P26368 STXBP4-206ENST00000463234 423 ntTSL 34.43□□□□□ -1.74e-6■■■■□ 24.7
U2AF2P26368 LINC00969-312ENST00000628823 616 ntTSL 512.77□□□□□ -0.374e-10■■■■□ 24.7
U2AF2P26368 LINC00969-235ENST00000598992 1005 ntTSL 512.39□□□□□ -0.434e-10■■■■□ 24.7
U2AF2P26368 LINC00969-278ENST00000626870 851 ntTSL 5 BASIC11.91□□□□□ -0.54e-10■■■■□ 24.7
U2AF2P26368 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC11.8□□□□□ -0.524e-7■■■■□ 24.7
U2AF2P26368 LARP1B-207ENST00000507377 1593 ntTSL 211.03□□□□□ -0.644e-7■■■■□ 24.7
U2AF2P26368 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC10.56□□□□□ -0.724e-7■■■■□ 24.7
U2AF2P26368 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.2□□□□□ -1.14e-7■■■■□ 24.7
U2AF2P26368 RICTOR-210ENST00000515846 677 ntTSL 58.09□□□□□ -1.113e-7■■■■□ 24.7
U2AF2P26368 RICTOR-205ENST00000509567 638 ntTSL 32.59□□□□□ -1.992e-7■■■■□ 24.7
U2AF2P26368 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.161e-7■■■■□ 24.7
U2AF2P26368 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.181e-7■■■■□ 24.7
U2AF2P26368 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.465e-6■■■■□ 24.7
U2AF2P26368 BLMH-202ENST00000577290 586 ntTSL 417.92■□□□□ 0.465e-6■■■■□ 24.7
U2AF2P26368 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.182e-6■■■■□ 24.7
U2AF2P26368 BLMH-205ENST00000578090 1483 ntTSL 215.67■□□□□ 0.15e-6■■■■□ 24.7
U2AF2P26368 RAD50-209ENST00000533482 4373 ntTSL 1 (best)14.07□□□□□ -0.165e-6■■■■□ 24.7
U2AF2P26368 EXOSC7-204ENST00000467846 1149 ntTSL 213.81□□□□□ -0.25e-6■■■■□ 24.7
U2AF2P26368 BLMH-204ENST00000577623 823 ntTSL 513.45□□□□□ -0.265e-6■■■■□ 24.7
U2AF2P26368 BLMH-209ENST00000580709 561 ntTSL 413.19□□□□□ -0.35e-6■■■■□ 24.7
U2AF2P26368 AC116366.3-201ENST00000638452 7893 ntAPPRIS ALT2 TSL 512.97□□□□□ -0.335e-6■■■■□ 24.7
U2AF2P26368 BLMH-213ENST00000584603 1020 ntTSL 512.93□□□□□ -0.345e-6■■■■□ 24.7
U2AF2P26368 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.425e-6■■■■□ 24.7
U2AF2P26368 TBC1D2B-209ENST00000486703 509 ntTSL 311.79□□□□□ -0.525e-6■■■■□ 24.7
U2AF2P26368 HMBOX1-205ENST00000518080 559 ntTSL 411.52□□□□□ -0.575e-6■■■■□ 24.7
U2AF2P26368 UIMC1-204ENST00000503273 955 ntTSL 510.58□□□□□ -0.725e-6■■■■□ 24.7
U2AF2P26368 TBC1D2B-204ENST00000435468 948 ntTSL 510.53□□□□□ -0.725e-6■■■■□ 24.7
U2AF2P26368 AC116366.3-203ENST00000639899 8173 ntTSL 59.33□□□□□ -0.925e-6■■■■□ 24.7
U2AF2P26368 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.932e-6■■■■□ 24.7
U2AF2P26368 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.99□□□□□ -0.975e-6■■■■□ 24.7
U2AF2P26368 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.075e-6■■■■□ 24.7
U2AF2P26368 AC116366.3-202ENST00000638568 7956 ntAPPRIS ALT2 TSL 57.87□□□□□ -1.155e-6■■■■□ 24.7
U2AF2P26368 AC116366.3-204ENST00000638504 7262 ntAPPRIS P5 TSL 57.86□□□□□ -1.155e-6■■■■□ 24.7
U2AF2P26368 RAD50-206ENST00000455677 564 ntTSL 57.41□□□□□ -1.225e-6■■■■□ 24.7
U2AF2P26368 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.445e-6■■■■□ 24.7
U2AF2P26368 EIF1AY-204ENST00000465253 855 ntTSL 25.54□□□□□ -1.525e-6■■■■□ 24.7
U2AF2P26368 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.47□□□□□ -1.855e-6■■■■□ 24.7
U2AF2P26368 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.872e-6■■■■□ 24.7
U2AF2P26368 GSAP-202ENST00000334003 2277 ntTSL 28.64□□□□□ -1.035e-10■■■■□ 24.7
U2AF2P26368 WDR27-205ENST00000467418 947 ntTSL 511.61□□□□□ -0.556e-9■■■■□ 24.7
U2AF2P26368 SENP6-211ENST00000493959 867 ntTSL 325.24■■□□□ 1.635e-8■■■■□ 24.7
U2AF2P26368 RICTOR-206ENST00000510711 3126 ntTSL 211.44□□□□□ -0.587e-7■■■■□ 24.7
U2AF2P26368 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC9.23□□□□□ -0.934e-11■■■■□ 24.7
U2AF2P26368 DCAF8-209ENST00000466253 1078 ntTSL 511.35□□□□□ -0.591e-8■■■■□ 24.7
U2AF2P26368 KLC4-211ENST00000469987 765 ntTSL 516.02■□□□□ 0.165e-7■■■■□ 24.6
U2AF2P26368 KLC4-207ENST00000463063 841 ntTSL 315.32■□□□□ 0.045e-7■■■■□ 24.6
U2AF2P26368 EPB41-211ENST00000488277 262 ntTSL 31.47□□□□□ -2.172e-8■■■■□ 24.6
U2AF2P26368 TMEM131-209ENST00000489507 568 ntTSL 317.91■□□□□ 0.463e-6■■■■□ 24.6
U2AF2P26368 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.38■□□□□ 0.218e-35■■■■□ 24.6
U2AF2P26368 CSTF3-204ENST00000524556 558 ntTSL 315.96■□□□□ 0.158e-35■■■■□ 24.6
U2AF2P26368 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.01□□□□□ -0.015e-7■■■■□ 24.6
U2AF2P26368 CSTF3-205ENST00000524775 434 ntTSL 413.64□□□□□ -0.238e-35■■■■□ 24.6
U2AF2P26368 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC12.11□□□□□ -0.478e-35■■■■□ 24.6
U2AF2P26368 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.255e-7■■■■□ 24.6
U2AF2P26368 CSTF3-207ENST00000526480 479 ntTSL 36.88□□□□□ -1.315e-7■■■■□ 24.6
U2AF2P26368 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.272e-7■■■■□ 24.6
U2AF2P26368 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.22e-7■■■■□ 24.6
U2AF2P26368 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.822e-7■■■■□ 24.6
U2AF2P26368 TMEM55B-203ENST00000553460 811 ntTSL 517.87■□□□□ 0.452e-7■■■■□ 24.6
U2AF2P26368 TMEM55B-207ENST00000557041 3453 ntTSL 217.51■□□□□ 0.392e-7■■■■□ 24.6
U2AF2P26368 PARP6-214ENST00000567440 2271 ntTSL 515.75■□□□□ 0.112e-7■■■■□ 24.6
U2AF2P26368 PARP6-207ENST00000565443 2305 ntTSL 214.49□□□□□ -0.092e-7■■■■□ 24.6
U2AF2P26368 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC13.57□□□□□ -0.242e-7■■■■□ 24.6
U2AF2P26368 PARP6-204ENST00000419739 1718 ntTSL 1 (best)13.17□□□□□ -0.32e-7■■■■□ 24.6
U2AF2P26368 PARP6-202ENST00000287196 2625 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.332e-7■■■■□ 24.6
U2AF2P26368 PARP6-203ENST00000413097 2750 ntTSL 212.48□□□□□ -0.412e-7■■■■□ 24.6
U2AF2P26368 TMEM55B-205ENST00000554028 1118 ntTSL 212□□□□□ -0.492e-7■■■■□ 24.6
U2AF2P26368 PARP6-201ENST00000260376 2142 ntTSL 5 BASIC11.8□□□□□ -0.522e-7■■■■□ 24.6
U2AF2P26368 PARP6-205ENST00000544520 2341 ntTSL 1 (best)11.1□□□□□ -0.632e-7■■■■□ 24.6
Retrieved 100 of 36,523 protein–RNA pairs in 421.6 ms