RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 NISCHQ9Y2I1 1504 aa5.41□□□□□ -1.54
CLOCK-201ENST00000309964 DCAF8L2P0C7V8 631 aa5.4□□□□□ -1.55
CLOCK-201ENST00000309964 FAM9AQ8IZU1 332 aaPredicted RBP5.29□□□□□ -1.56
CLOCK-201ENST00000309964 APLP2Q06481 763 aa5.05□□□□□ -1.6
CLOCK-201ENST00000309964 PELP1Q8IZL8 1130 aaKnown RBP5.02□□□□□ -1.61
CLOCK-201ENST00000309964 SUPT5HO00267 1087 aaKnown RBP4.96□□□□□ -1.61
CLOCK-201ENST00000309964 SHROOM4Q9ULL8 1493 aa4.82□□□□□ -1.64
CLOCK-201ENST00000309964 CCER1Q8TC90 406 aaPredicted RBP4.8□□□□□ -1.64
CLOCK-201ENST00000309964 ZEB1P37275 1124 aaPredicted RBP4.79□□□□□ -1.64
CLOCK-201ENST00000309964 TRIM41Q8WV44 630 aa4.77□□□□□ -1.65
CLOCK-201ENST00000309964 CCDC180Q9P1Z9 1646 aa4.76□□□□□ -1.65
CLOCK-201ENST00000309964 UBTFP17480 764 aaKnown RBP4.72□□□□□ -1.65
CLOCK-201ENST00000309964 ATP1B4Q9UN42 357 aaPredicted RBP4.7□□□□□ -1.66
CLOCK-201ENST00000309964 CENPBP07199 599 aaPredicted RBP4.68□□□□□ -1.66
CLOCK-201ENST00000309964 MYT1LQ9UL68 1186 aa4.66□□□□□ -1.66
CLOCK-201ENST00000309964 MYT1Q01538 1121 aa4.65□□□□□ -1.67
CLOCK-201ENST00000309964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.63□□□□□ -1.67
CLOCK-201ENST00000309964 HNRNPUL2Q1KMD3 747 aaKnown RBP4.63□□□□□ -1.67
CLOCK-201ENST00000309964 NEFLP07196 543 aa4.63□□□□□ -1.67
CLOCK-201ENST00000309964 ACIN1Q9UKV3 1341 aaKnown RBP4.61□□□□□ -1.67
CLOCK-201ENST00000309964 ABCC9O60706 1549 aa4.61□□□□□ -1.67
CLOCK-201ENST00000309964 YTHDC1Q96MU7 727 aaKnown RBP4.6□□□□□ -1.67
CLOCK-201ENST00000309964 RB1CC1Q8TDY2 1594 aa4.6□□□□□ -1.67
CLOCK-201ENST00000309964 EHMT2Q96KQ7 1210 aa4.59□□□□□ -1.67
CLOCK-201ENST00000309964 ERICH6Q7L0X2 663 aa4.59□□□□□ -1.67
CLOCK-201ENST00000309964 CDK11AQ9UQ88 783 aaPredicted RBP4.58□□□□□ -1.68
CLOCK-201ENST00000309964 PCGF6Q9BYE7 350 aa4.56□□□□□ -1.68
CLOCK-201ENST00000309964 NACADO15069 1562 aa4.55□□□□□ -1.68
CLOCK-201ENST00000309964 RANGAP1P46060 587 aaPredicted RBP4.55□□□□□ -1.68
CLOCK-201ENST00000309964 DAXXQ9UER7 740 aaPredicted RBP4.54□□□□□ -1.68
CLOCK-201ENST00000309964 NEFMP07197 916 aa4.54□□□□□ -1.68
CLOCK-201ENST00000309964 NPM1P06748 294 aaKnown RBP eCLIP4.54□□□□□ -1.68
CLOCK-201ENST00000309964 TRIM26Q12899 539 aaPredicted RBP4.53□□□□□ -1.68
CLOCK-201ENST00000309964 ESF1Q9H501 851 aaKnown RBP4.53□□□□□ -1.68
CLOCK-201ENST00000309964 ZBTB47Q9UFB7 747 aaPredicted RBP4.47□□□□□ -1.69
CLOCK-201ENST00000309964 SLC24A1O60721 1099 aa4.46□□□□□ -1.7
CLOCK-201ENST00000309964 FBLN2P98095 1184 aa4.46□□□□□ -1.7
CLOCK-201ENST00000309964 TTBK1Q5TCY1 1321 aaPredicted RBP4.46□□□□□ -1.7
CLOCK-201ENST00000309964 SLC4A1APQ9BWU0 796 aaKnown RBP4.46□□□□□ -1.7
CLOCK-201ENST00000309964 SCRIBQ14160 1630 aa4.45□□□□□ -1.7
CLOCK-201ENST00000309964 ZCCHC6Q5VYS8 1495 aaKnown RBP4.45□□□□□ -1.7
CLOCK-201ENST00000309964 PABPN1Q86U42 306 aaKnown RBP eCLIP4.44□□□□□ -1.7
CLOCK-201ENST00000309964 DCAF1Q9Y4B6 1507 aa4.42□□□□□ -1.7
CLOCK-201ENST00000309964 FAM50AQ14320 339 aaKnown RBP4.42□□□□□ -1.7
CLOCK-201ENST00000309964 EEA1Q15075 1411 aa4.42□□□□□ -1.7
CLOCK-201ENST00000309964 TRIM52Q96A61 297 aa4.41□□□□□ -1.7
CLOCK-201ENST00000309964 BCANQ96GW7 911 aa4.41□□□□□ -1.7
CLOCK-201ENST00000309964 ITGAEP38570 1179 aa4.41□□□□□ -1.7
CLOCK-201ENST00000309964 STAG3Q9UJ98 1225 aa4.4□□□□□ -1.71
CLOCK-201ENST00000309964 CLSPNQ9HAW4 1339 aa4.4□□□□□ -1.71
CLOCK-201ENST00000309964 TSPY4P0CV99 314 aa4.39□□□□□ -1.71
CLOCK-201ENST00000309964 TSPY10P0CW01 314 aa4.39□□□□□ -1.71
CLOCK-201ENST00000309964 BAZ1AQ9NRL2 1556 aaPredicted RBP4.39□□□□□ -1.71
CLOCK-201ENST00000309964 CHMP7Q8WUX9 453 aaPredicted RBP4.39□□□□□ -1.71
CLOCK-201ENST00000309964 POLR3GLQ9BT43 218 aa4.39□□□□□ -1.71
CLOCK-201ENST00000309964 RSF1Q96T23 1441 aaPredicted RBP4.38□□□□□ -1.71
CLOCK-201ENST00000309964 MYO15BQ96JP2 1530 aa4.38□□□□□ -1.71
CLOCK-201ENST00000309964 EIF5BO60841 1220 aaKnown RBP4.38□□□□□ -1.71
CLOCK-201ENST00000309964 CHIC1Q5VXU3 224 aa4.38□□□□□ -1.71
CLOCK-201ENST00000309964 CSRNP3Q8WYN3 585 aa4.38□□□□□ -1.71
CLOCK-201ENST00000309964 ZNF316A6NFI3 1004 aaPredicted RBP4.38□□□□□ -1.71
CLOCK-201ENST00000309964 ERCC6Q03468 1493 aa4.37□□□□□ -1.71
CLOCK-201ENST00000309964 BAZ1BQ9UIG0 1483 aaKnown RBP4.37□□□□□ -1.71
CLOCK-201ENST00000309964 NPM2Q86SE8 214 aaKnown RBP4.37□□□□□ -1.71
CLOCK-201ENST00000309964 SMARCA2P51531 1590 aa4.36□□□□□ -1.71
CLOCK-201ENST00000309964 ANP32CO43423 234 aa4.36□□□□□ -1.71
CLOCK-201ENST00000309964 HDGFP51858 240 aaKnown RBP4.36□□□□□ -1.71
CLOCK-201ENST00000309964 CDCA8Q53HL2 280 aa4.34□□□□□ -1.71
CLOCK-201ENST00000309964 MTUS2Q5JR59 1369 aa4.33□□□□□ -1.72
CLOCK-201ENST00000309964 RTL5Q5HYW3 569 aaPredicted RBP4.32□□□□□ -1.72
CLOCK-201ENST00000309964 KIF27Q86VH2 1401 aa4.32□□□□□ -1.72
CLOCK-201ENST00000309964 PLEKHD1A6NEE1 506 aa4.32□□□□□ -1.72
CLOCK-201ENST00000309964 FHAD1B1AJZ9 1412 aa4.32□□□□□ -1.72
CLOCK-201ENST00000309964 PDS5BQ9NTI5 1447 aa4.32□□□□□ -1.72
CLOCK-201ENST00000309964 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.32□□□□□ -1.72
CLOCK-201ENST00000309964 CANXP27824 592 aaKnown RBP4.31□□□□□ -1.72
CLOCK-201ENST00000309964 ABCC8Q09428 1581 aa4.31□□□□□ -1.72
CLOCK-201ENST00000309964 TONSLQ96HA7 1378 aa4.31□□□□□ -1.72
CLOCK-201ENST00000309964 UPF2Q9HAU5 1272 aaKnown RBP4.31□□□□□ -1.72
CLOCK-201ENST00000309964 CLIP1P30622 1438 aa4.31□□□□□ -1.72
CLOCK-201ENST00000309964 CEP162Q5TB80 1403 aa4.3□□□□□ -1.72
CLOCK-201ENST00000309964 CHMP4AQ9BY43 222 aa4.3□□□□□ -1.72
CLOCK-201ENST00000309964 ZNF777Q9ULD5 760 aaPredicted RBP4.3□□□□□ -1.72
CLOCK-201ENST00000309964 HAP1P54257 671 aaPredicted RBP4.29□□□□□ -1.72
CLOCK-201ENST00000309964 WRNQ14191 1432 aaPredicted RBP eCLIP4.29□□□□□ -1.72
CLOCK-201ENST00000309964 CARMIL2Q6F5E8 1435 aa4.29□□□□□ -1.72
CLOCK-201ENST00000309964 HRCP23327 699 aa4.29□□□□□ -1.72
CLOCK-201ENST00000309964 ANP32BQ92688 251 aaKnown RBP4.29□□□□□ -1.72
CLOCK-201ENST00000309964 PNNQ9H307 717 aaKnown RBP4.29□□□□□ -1.72
CLOCK-201ENST00000309964 CHMP4BQ9H444 224 aaKnown RBP4.28□□□□□ -1.72
CLOCK-201ENST00000309964 DIEXFQ68CQ4 756 aaKnown RBP4.28□□□□□ -1.72
CLOCK-201ENST00000309964 ANO8Q9HCE9 1232 aaPredicted RBP4.28□□□□□ -1.72
CLOCK-201ENST00000309964 EIF4G2P78344 907 aaKnown RBP eCLIP4.28□□□□□ -1.72
CLOCK-201ENST00000309964 GOLGA3Q08378 1498 aa4.27□□□□□ -1.73
CLOCK-201ENST00000309964 KANK1Q14678 1352 aa4.27□□□□□ -1.73
CLOCK-201ENST00000309964 CEP164Q9UPV0 1460 aa4.27□□□□□ -1.73
CLOCK-201ENST00000309964 AEBP2Q6ZN18 517 aaPredicted RBP4.27□□□□□ -1.73
CLOCK-201ENST00000309964 ZNF326Q5BKZ1 582 aaKnown RBP4.27□□□□□ -1.73
CLOCK-201ENST00000309964 PPP1R15AO75807 674 aaPredicted RBP4.27□□□□□ -1.73
CLOCK-201ENST00000309964 NEUROD1Q13562 356 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms