Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 PBY1YBR094W 2262 nt1.97□□□□□ -2.09
CDC9P04819 snR74snR74 88 nt1.97□□□□□ -2.09
CDC9P04819 EMC5YIL027C 426 nt1.97□□□□□ -2.09
CDC9P04819 YJL052C-AYJL052C-A 120 nt1.97□□□□□ -2.09
CDC9P04819 DGR1YNL130C-A 147 nt1.97□□□□□ -2.09
CDC9P04819 LHS1YKL073W 2646 nt1.97□□□□□ -2.09
CDC9P04819 COG4YPR105C 2586 nt1.97□□□□□ -2.09
CDC9P04819 ALK1YGL021W 2283 nt1.96□□□□□ -2.1
CDC9P04819 SPP41YDR464W 4308 nt1.96□□□□□ -2.1
CDC9P04819 ANS1YHR126C 480 nt1.96□□□□□ -2.1
CDC9P04819 YBL008W-AYBL008W-A 240 nt1.96□□□□□ -2.1
CDC9P04819 SPO24YPR036W-A 204 nt1.96□□□□□ -2.1
CDC9P04819 SAP190YKR028W 3102 nt1.96□□□□□ -2.1
CDC9P04819 GCN2YDR283C 4980 nt1.96□□□□□ -2.1
CDC9P04819 ECM12YHR021W-A 456 nt1.95□□□□□ -2.1
CDC9P04819 SAC3YDR159W 3906 nt1.95□□□□□ -2.1
CDC9P04819 USO1YDL058W 5373 nt1.95□□□□□ -2.1
CDC9P04819 TRM3YDL112W 4311 nt1.94□□□□□ -2.1
CDC9P04819 NUT1YGL151W 3399 nt1.94□□□□□ -2.1
CDC9P04819 UFD4YKL010C 4452 nt1.94□□□□□ -2.1
CDC9P04819 IFH1YLR223C 3258 nt1.93□□□□□ -2.1
CDC9P04819 PIP2YOR363C 2991 nt1.93□□□□□ -2.1
CDC9P04819 YDR521WYDR521W 336 nt1.93□□□□□ -2.1
CDC9P04819 YJL182CYJL182C 318 nt1.93□□□□□ -2.1
CDC9P04819 SKI3YPR189W 4299 nt1.92□□□□□ -2.1
CDC9P04819 UTP22YGR090W 3714 nt1.92□□□□□ -2.1
CDC9P04819 ADR1YDR216W 3972 nt1.91□□□□□ -2.1
CDC9P04819 ULI1YFR026C 510 nt1.91□□□□□ -2.1
CDC9P04819 BRE1YDL074C 2103 nt1.91□□□□□ -2.1
CDC9P04819 RAD50YNL250W 3939 nt1.9□□□□□ -2.11
CDC9P04819 YNL198CYNL198C 303 nt1.9□□□□□ -2.11
CDC9P04819 UBP2YOR124C 3819 nt1.9□□□□□ -2.11
CDC9P04819 KIP1YBL063W 3336 nt1.89□□□□□ -2.11
CDC9P04819 UBR2YLR024C 5619 nt1.89□□□□□ -2.11
CDC9P04819 TBS1YBR150C 3285 nt1.89□□□□□ -2.11
CDC9P04819 COF1YLL050C 432 nt1.89□□□□□ -2.11
CDC9P04819 UFD2YDL190C 2886 nt1.88□□□□□ -2.11
CDC9P04819 AIM44YPL158C 2277 nt1.88□□□□□ -2.11
CDC9P04819 SLD3YGL113W 2007 nt1.88□□□□□ -2.11
CDC9P04819 GYP5YPL249C 2685 nt1.88□□□□□ -2.11
CDC9P04819 NCA2YPR155C 1851 nt1.88□□□□□ -2.11
CDC9P04819 YCS4YLR272C 3531 nt1.87□□□□□ -2.11
CDC9P04819 ALY2YJL084C 3141 nt1.87□□□□□ -2.11
CDC9P04819 YLR466C-BYLR466C-B 117 nt1.87□□□□□ -2.11
CDC9P04819 YMR045CYMR045C 5268 nt1.87□□□□□ -2.11
CDC9P04819 CTF4YPR135W 2784 nt1.87□□□□□ -2.11
CDC9P04819 KCS1YDR017C 3153 nt1.86□□□□□ -2.11
CDC9P04819 SBE22YHR103W 2559 nt1.86□□□□□ -2.11
CDC9P04819 YGR151CYGR151C 336 nt1.86□□□□□ -2.11
CDC9P04819 YHR210CYHR210C 1026 nt1.86□□□□□ -2.11
CDC9P04819 YBR206WYBR206W 324 nt1.86□□□□□ -2.11
CDC9P04819 YLL054CYLL054C 2532 nt1.86□□□□□ -2.11
CDC9P04819 FKS1YLR342W 5631 nt1.85□□□□□ -2.11
CDC9P04819 YLL019W-AYLL019W-A 93 nt1.85□□□□□ -2.11
CDC9P04819 AHC1YOR023C 1701 nt1.85□□□□□ -2.11
CDC9P04819 MMS4YBR098W 2076 nt1.84□□□□□ -2.11
CDC9P04819 YGL217CYGL217C 342 nt1.84□□□□□ -2.11
CDC9P04819 YNL097C-BYNL097C-B 123 nt1.84□□□□□ -2.11
CDC9P04819 LRE1YCL051W 1752 nt1.84□□□□□ -2.12
CDC9P04819 YLR140WYLR140W 327 nt1.83□□□□□ -2.12
CDC9P04819 YLR342W-AYLR342W-A 174 nt1.83□□□□□ -2.12
CDC9P04819 PAN2YGL094C 3348 nt1.83□□□□□ -2.12
CDC9P04819 YDL206WYDL206W 2289 nt1.83□□□□□ -2.12
CDC9P04819 YHR214C-BYHR214C-B 5382 nt1.83□□□□□ -2.12
CDC9P04819 NEO1YIL048W 3456 nt1.82□□□□□ -2.12
CDC9P04819 SLX4YLR135W 2247 nt1.82□□□□□ -2.12
CDC9P04819 FIG4YNL325C 2640 nt1.82□□□□□ -2.12
CDC9P04819 YDL196WYDL196W 330 nt1.82□□□□□ -2.12
CDC9P04819 YBR131C-AYBR131C-A 90 nt1.82□□□□□ -2.12
CDC9P04819 YOR093CYOR093C 4947 nt1.81□□□□□ -2.12
CDC9P04819 YLR294CYLR294C 330 nt1.81□□□□□ -2.12
CDC9P04819 PKH3YDR466W 2697 nt1.81□□□□□ -2.12
CDC9P04819 SMC4YLR086W 4257 nt1.8□□□□□ -2.12
CDC9P04819 YJL022WYJL022W 309 nt1.79□□□□□ -2.12
CDC9P04819 snR46snR46 197 nt1.79□□□□□ -2.12
CDC9P04819 YJL150WYJL150W 303 nt1.78□□□□□ -2.12
CDC9P04819 YLR422WYLR422W 5799 nt1.78□□□□□ -2.13
CDC9P04819 YOR161W-BYOR161W-B 261 nt1.77□□□□□ -2.13
CDC9P04819 YGR109W-BYGR109W-B 4644 nt1.77□□□□□ -2.13
CDC9P04819 YER172C-AYER172C-A 381 nt1.76□□□□□ -2.13
CDC9P04819 YOR345CYOR345C 351 nt1.76□□□□□ -2.13
CDC9P04819 IRC20YLR247C 4671 nt1.76□□□□□ -2.13
CDC9P04819 YMR247W-AYMR247W-A 144 nt1.75□□□□□ -2.13
CDC9P04819 APL1YJR005W 2103 nt1.75□□□□□ -2.13
CDC9P04819 PRP39YML046W 1890 nt1.74□□□□□ -2.13
CDC9P04819 YDR354C-AYDR354C-A 144 nt1.74□□□□□ -2.13
CDC9P04819 KAP122YGL016W 3246 nt1.74□□□□□ -2.13
CDC9P04819 YOR019WYOR019W 2193 nt1.74□□□□□ -2.13
CDC9P04819 BST1YFL025C 3090 nt1.73□□□□□ -2.13
CDC9P04819 MYO2YOR326W 4725 nt1.73□□□□□ -2.13
CDC9P04819 HAL9YOL089C 3093 nt1.72□□□□□ -2.13
CDC9P04819 YJL026C-AYJL026C-A 222 nt1.72□□□□□ -2.13
CDC9P04819 RPL33BYOR234C 324 nt1.72□□□□□ -2.13
CDC9P04819 snR52snR52 92 nt1.72□□□□□ -2.13
CDC9P04819 YAR009CYAR009C 3591 nt1.72□□□□□ -2.13
CDC9P04819 SMC1YFL008W 3678 nt1.71□□□□□ -2.14
CDC9P04819 snR14snR14 160 nt1.71□□□□□ -2.14
CDC9P04819 TRS65YGR166W 1683 nt1.71□□□□□ -2.14
CDC9P04819 YEL073CYEL073C 324 nt1.7□□□□□ -2.14
CDC9P04819 tT(UGU)HtT(UGU)H 72 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 51.7 ms