Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.14■□□□□ 0.97
ERBB2P04626 TCF3P1-201ENST00000423021 1937 ntBASIC21.14■□□□□ 0.97
ERBB2P04626 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERBB2P04626 KRT8P17-201ENST00000453110 1448 ntBASIC21.13■□□□□ 0.97
ERBB2P04626 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERBB2P04626 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
ERBB2P04626 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
ERBB2P04626 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
ERBB2P04626 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERBB2P04626 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERBB2P04626 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.13■□□□□ 0.97
ERBB2P04626 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.13■□□□□ 0.97
ERBB2P04626 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.13■□□□□ 0.97
ERBB2P04626 AC069152.1-201ENST00000438030 544 ntBASIC21.13■□□□□ 0.97
ERBB2P04626 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.13■□□□□ 0.97
ERBB2P04626 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
ERBB2P04626 AC083880.1-201ENST00000608266 535 ntBASIC21.13■□□□□ 0.97
ERBB2P04626 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
ERBB2P04626 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERBB2P04626 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.13■□□□□ 0.97
ERBB2P04626 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ERBB2P04626 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
ERBB2P04626 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.12■□□□□ 0.97
ERBB2P04626 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.12■□□□□ 0.97
ERBB2P04626 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.12■□□□□ 0.97
ERBB2P04626 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ERBB2P04626 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.12■□□□□ 0.97
ERBB2P04626 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.12■□□□□ 0.97
ERBB2P04626 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.12■□□□□ 0.97
ERBB2P04626 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ERBB2P04626 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.12■□□□□ 0.97
ERBB2P04626 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.12■□□□□ 0.97
ERBB2P04626 AL031963.3-201ENST00000606441 850 ntBASIC21.12■□□□□ 0.97
ERBB2P04626 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERBB2P04626 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.11■□□□□ 0.97
ERBB2P04626 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERBB2P04626 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ERBB2P04626 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.11■□□□□ 0.97
ERBB2P04626 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERBB2P04626 AC073210.2-201ENST00000430369 194 ntBASIC21.11■□□□□ 0.97
ERBB2P04626 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERBB2P04626 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.11■□□□□ 0.97
ERBB2P04626 AC133041.1-202ENST00000642053 222 ntBASIC21.11■□□□□ 0.97
ERBB2P04626 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERBB2P04626 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERBB2P04626 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ERBB2P04626 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ERBB2P04626 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERBB2P04626 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERBB2P04626 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERBB2P04626 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.11■□□□□ 0.97
ERBB2P04626 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ERBB2P04626 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.1■□□□□ 0.97
ERBB2P04626 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.1■□□□□ 0.97
ERBB2P04626 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.1■□□□□ 0.97
ERBB2P04626 AC097658.1-201ENST00000475555 843 ntBASIC21.1■□□□□ 0.97
ERBB2P04626 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.1■□□□□ 0.97
ERBB2P04626 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 AL691432.2-201ENST00000607222 2038 ntBASIC21.1■□□□□ 0.97
ERBB2P04626 KRT8P20-201ENST00000423953 1409 ntBASIC21.1■□□□□ 0.97
ERBB2P04626 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERBB2P04626 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERBB2P04626 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.09■□□□□ 0.97
ERBB2P04626 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ERBB2P04626 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERBB2P04626 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ERBB2P04626 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.09■□□□□ 0.97
ERBB2P04626 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERBB2P04626 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERBB2P04626 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.09■□□□□ 0.97
ERBB2P04626 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERBB2P04626 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERBB2P04626 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERBB2P04626 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERBB2P04626 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms