Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.6■■□□□ 1.05
C4BPAP04003 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 HLA-G-202ENST00000376815 851 ntBASIC21.6■■□□□ 1.05
C4BPAP04003 HLA-G-203ENST00000376818 1127 ntBASIC21.6■■□□□ 1.05
C4BPAP04003 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.6■■□□□ 1.05
C4BPAP04003 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.6■■□□□ 1.05
C4BPAP04003 PNMA6B-201ENST00000538162 1200 ntBASIC21.6■■□□□ 1.05
C4BPAP04003 KRT18P6-201ENST00000555540 1265 ntBASIC21.6■■□□□ 1.05
C4BPAP04003 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.6■■□□□ 1.05
C4BPAP04003 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.6■■□□□ 1.05
C4BPAP04003 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 AC073130.3-201ENST00000624389 2278 ntBASIC21.6■■□□□ 1.05
C4BPAP04003 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.6■■□□□ 1.05
C4BPAP04003 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
C4BPAP04003 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C4BPAP04003 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.59■■□□□ 1.05
C4BPAP04003 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
C4BPAP04003 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.59■■□□□ 1.05
C4BPAP04003 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.59■■□□□ 1.05
C4BPAP04003 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.59■■□□□ 1.05
C4BPAP04003 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.59■■□□□ 1.05
C4BPAP04003 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
C4BPAP04003 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
C4BPAP04003 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
C4BPAP04003 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
C4BPAP04003 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C4BPAP04003 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.58■■□□□ 1.05
C4BPAP04003 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.58■■□□□ 1.05
C4BPAP04003 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.58■■□□□ 1.05
C4BPAP04003 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
C4BPAP04003 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.58■■□□□ 1.05
C4BPAP04003 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
C4BPAP04003 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.58■■□□□ 1.05
C4BPAP04003 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.58■■□□□ 1.05
C4BPAP04003 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.58■■□□□ 1.05
C4BPAP04003 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C4BPAP04003 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
C4BPAP04003 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
C4BPAP04003 AC112907.3-201ENST00000577781 2400 ntBASIC21.58■■□□□ 1.04
C4BPAP04003 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
C4BPAP04003 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
C4BPAP04003 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.58■■□□□ 1.04
C4BPAP04003 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
C4BPAP04003 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.57■■□□□ 1.04
C4BPAP04003 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.57■■□□□ 1.04
C4BPAP04003 PKD1P6-201ENST00000343738 4769 ntBASIC21.57■■□□□ 1.04
C4BPAP04003 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.57■■□□□ 1.04
C4BPAP04003 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C4BPAP04003 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C4BPAP04003 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.57■■□□□ 1.04
C4BPAP04003 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.57■■□□□ 1.04
C4BPAP04003 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.57■■□□□ 1.04
C4BPAP04003 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C4BPAP04003 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C4BPAP04003 AC006557.6-201ENST00000623071 864 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms