Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ALDH1A1P00352 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ALDH1A1P00352 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ALDH1A1P00352 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ALDH1A1P00352 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ALDH1A1P00352 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.07■■□□□ 1.28
ALDH1A1P00352 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.07■■□□□ 1.28
ALDH1A1P00352 FAM207BP-201ENST00000447172 505 ntBASIC23.07■■□□□ 1.28
ALDH1A1P00352 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.07■■□□□ 1.28
ALDH1A1P00352 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.07■■□□□ 1.28
ALDH1A1P00352 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
ALDH1A1P00352 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.07■■□□□ 1.28
ALDH1A1P00352 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ALDH1A1P00352 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ALDH1A1P00352 AC011484.1-201ENST00000377652 1995 ntBASIC23.07■■□□□ 1.28
ALDH1A1P00352 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ALDH1A1P00352 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ALDH1A1P00352 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ALDH1A1P00352 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ALDH1A1P00352 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
ALDH1A1P00352 C1QL1P1-201ENST00000568105 661 ntBASIC23.06■■□□□ 1.28
ALDH1A1P00352 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ALDH1A1P00352 AC139887.4-201ENST00000607877 719 ntBASIC23.06■■□□□ 1.28
ALDH1A1P00352 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.06■■□□□ 1.28
ALDH1A1P00352 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ALDH1A1P00352 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
ALDH1A1P00352 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.05■■□□□ 1.28
ALDH1A1P00352 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.05■■□□□ 1.28
ALDH1A1P00352 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ALDH1A1P00352 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ALDH1A1P00352 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ALDH1A1P00352 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.05■■□□□ 1.28
ALDH1A1P00352 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ALDH1A1P00352 TSPY5P-201ENST00000426936 936 ntBASIC23.05■■□□□ 1.28
ALDH1A1P00352 AC092647.4-201ENST00000457211 535 ntBASIC23.05■■□□□ 1.28
ALDH1A1P00352 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.05■■□□□ 1.28
ALDH1A1P00352 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.05■■□□□ 1.28
ALDH1A1P00352 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.05■■□□□ 1.28
ALDH1A1P00352 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.05■■□□□ 1.28
ALDH1A1P00352 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.05■■□□□ 1.28
ALDH1A1P00352 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ALDH1A1P00352 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ALDH1A1P00352 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.05■■□□□ 1.28
ALDH1A1P00352 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ALDH1A1P00352 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.04■■□□□ 1.28
ALDH1A1P00352 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ALDH1A1P00352 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ALDH1A1P00352 AL450487.1-201ENST00000426799 995 ntBASIC23.04■■□□□ 1.28
ALDH1A1P00352 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.04■■□□□ 1.28
ALDH1A1P00352 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.04■■□□□ 1.28
ALDH1A1P00352 AL138966.2-201ENST00000621997 464 ntBASIC23.04■■□□□ 1.28
ALDH1A1P00352 AL121956.5-201ENST00000625261 221 ntBASIC23.04■■□□□ 1.28
ALDH1A1P00352 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ALDH1A1P00352 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.04■■□□□ 1.28
ALDH1A1P00352 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ALDH1A1P00352 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
ALDH1A1P00352 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ALDH1A1P00352 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
ALDH1A1P00352 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ALDH1A1P00352 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ALDH1A1P00352 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.03■■□□□ 1.28
ALDH1A1P00352 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ALDH1A1P00352 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
ALDH1A1P00352 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ALDH1A1P00352 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.03■■□□□ 1.28
ALDH1A1P00352 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
ALDH1A1P00352 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.03■■□□□ 1.28
ALDH1A1P00352 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ALDH1A1P00352 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ALDH1A1P00352 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ALDH1A1P00352 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ALDH1A1P00352 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ALDH1A1P00352 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ALDH1A1P00352 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.02■■□□□ 1.28
ALDH1A1P00352 PCED1CP-201ENST00000419887 785 ntBASIC23.02■■□□□ 1.28
ALDH1A1P00352 DUSP5P1-201ENST00000441325 1139 ntBASIC23.02■■□□□ 1.28
ALDH1A1P00352 AC011506.1-201ENST00000474329 610 ntBASIC23.02■■□□□ 1.28
ALDH1A1P00352 YBX1P2-201ENST00000489612 999 ntBASIC23.02■■□□□ 1.28
ALDH1A1P00352 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.02■■□□□ 1.28
ALDH1A1P00352 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ALDH1A1P00352 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.02■■□□□ 1.28
ALDH1A1P00352 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ALDH1A1P00352 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ALDH1A1P00352 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ALDH1A1P00352 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.02■■□□□ 1.28
ALDH1A1P00352 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ALDH1A1P00352 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ALDH1A1P00352 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
ALDH1A1P00352 INGX-201ENST00000359239 846 ntBASIC23.01■■□□□ 1.27
ALDH1A1P00352 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ALDH1A1P00352 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ALDH1A1P00352 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
ALDH1A1P00352 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.01■■□□□ 1.27
ALDH1A1P00352 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.01■■□□□ 1.27
ALDH1A1P00352 AC116562.4-202ENST00000641738 218 ntBASIC23.01■■□□□ 1.27
ALDH1A1P00352 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ALDH1A1P00352 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ALDH1A1P00352 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ALDH1A1P00352 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ALDH1A1P00352 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms