Protein–RNA interactions for Protein: O94907

DKK1, Dickkopf-related protein 1, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK1O94907 AC006011.2-201ENST00000621313 1158 ntBASIC19.28■□□□□ 0.68
DKK1O94907 CR392000.1-201ENST00000624770 1228 ntBASIC19.28■□□□□ 0.68
DKK1O94907 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
DKK1O94907 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DKK1O94907 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DKK1O94907 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.28■□□□□ 0.68
DKK1O94907 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.28■□□□□ 0.68
DKK1O94907 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
DKK1O94907 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DKK1O94907 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.27■□□□□ 0.68
DKK1O94907 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DKK1O94907 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
DKK1O94907 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DKK1O94907 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.27■□□□□ 0.68
DKK1O94907 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DKK1O94907 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
DKK1O94907 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DKK1O94907 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DKK1O94907 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.27■□□□□ 0.68
DKK1O94907 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
DKK1O94907 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
DKK1O94907 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.27■□□□□ 0.68
DKK1O94907 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
DKK1O94907 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DKK1O94907 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DKK1O94907 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DKK1O94907 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
DKK1O94907 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
DKK1O94907 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DKK1O94907 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
DKK1O94907 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
DKK1O94907 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.26■□□□□ 0.67
DKK1O94907 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.26■□□□□ 0.67
DKK1O94907 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.26■□□□□ 0.67
DKK1O94907 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.26■□□□□ 0.67
DKK1O94907 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.26■□□□□ 0.67
DKK1O94907 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.26■□□□□ 0.67
DKK1O94907 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.26■□□□□ 0.67
DKK1O94907 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DKK1O94907 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.26■□□□□ 0.67
DKK1O94907 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
DKK1O94907 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DKK1O94907 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DKK1O94907 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DKK1O94907 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.25■□□□□ 0.67
DKK1O94907 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.25■□□□□ 0.67
DKK1O94907 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
DKK1O94907 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.25■□□□□ 0.67
DKK1O94907 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.25■□□□□ 0.67
DKK1O94907 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.25■□□□□ 0.67
DKK1O94907 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.25■□□□□ 0.67
DKK1O94907 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.25■□□□□ 0.67
DKK1O94907 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.25■□□□□ 0.67
DKK1O94907 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.25■□□□□ 0.67
DKK1O94907 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.25■□□□□ 0.67
DKK1O94907 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DKK1O94907 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
DKK1O94907 KRT8P36-201ENST00000489121 1440 ntBASIC19.25■□□□□ 0.67
DKK1O94907 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
DKK1O94907 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DKK1O94907 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.24■□□□□ 0.67
DKK1O94907 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DKK1O94907 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DKK1O94907 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DKK1O94907 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DKK1O94907 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
DKK1O94907 MESTP1-201ENST00000404287 994 ntBASIC19.24■□□□□ 0.67
DKK1O94907 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.24■□□□□ 0.67
DKK1O94907 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DKK1O94907 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
DKK1O94907 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.24■□□□□ 0.67
DKK1O94907 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.24■□□□□ 0.67
DKK1O94907 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DKK1O94907 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
DKK1O94907 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DKK1O94907 AC011484.1-201ENST00000377652 1995 ntBASIC19.23■□□□□ 0.67
DKK1O94907 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
DKK1O94907 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DKK1O94907 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DKK1O94907 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.23■□□□□ 0.67
DKK1O94907 AP005242.2-201ENST00000580065 1175 ntBASIC19.23■□□□□ 0.67
DKK1O94907 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.23■□□□□ 0.67
DKK1O94907 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DKK1O94907 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
DKK1O94907 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DKK1O94907 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DKK1O94907 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DKK1O94907 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DKK1O94907 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DKK1O94907 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms