Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC012676.1-201ENST00000574705 1949 ntBASIC26.83■■□□□ 1.89
LTN1O94822 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
LTN1O94822 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
LTN1O94822 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.83■■□□□ 1.89
LTN1O94822 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LTN1O94822 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LTN1O94822 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.83■■□□□ 1.89
LTN1O94822 MMP23A-201ENST00000234610 1017 ntBASIC26.83■■□□□ 1.89
LTN1O94822 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
LTN1O94822 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LTN1O94822 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.83■■□□□ 1.89
LTN1O94822 RBM42-202ENST00000586618 771 ntTSL 3 BASIC26.83■■□□□ 1.89
LTN1O94822 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LTN1O94822 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.83■■□□□ 1.89
LTN1O94822 FEM1AP4-201ENST00000443167 1987 ntBASIC26.83■■□□□ 1.88
LTN1O94822 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC26.83■■□□□ 1.88
LTN1O94822 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
LTN1O94822 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
LTN1O94822 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
LTN1O94822 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
LTN1O94822 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
LTN1O94822 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.82■■□□□ 1.88
LTN1O94822 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 YBX1P10-201ENST00000444752 975 ntBASIC26.82■■□□□ 1.88
LTN1O94822 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 AP002982.1-201ENST00000492365 877 ntBASIC26.82■■□□□ 1.88
LTN1O94822 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.82■■□□□ 1.88
LTN1O94822 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC26.82■■□□□ 1.88
LTN1O94822 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
LTN1O94822 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LTN1O94822 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC26.81■■□□□ 1.88
LTN1O94822 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC26.81■■□□□ 1.88
LTN1O94822 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LTN1O94822 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.81■■□□□ 1.88
LTN1O94822 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
LTN1O94822 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
LTN1O94822 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LTN1O94822 KSR1P1-201ENST00000446298 240 ntBASIC26.81■■□□□ 1.88
LTN1O94822 KRT18P35-201ENST00000510488 1269 ntBASIC26.81■■□□□ 1.88
LTN1O94822 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC26.81■■□□□ 1.88
LTN1O94822 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC26.81■■□□□ 1.88
LTN1O94822 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
LTN1O94822 AC092865.7-201ENST00000641832 219 ntBASIC26.81■■□□□ 1.88
LTN1O94822 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC26.81■■□□□ 1.88
LTN1O94822 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LTN1O94822 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LTN1O94822 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.8■■□□□ 1.88
LTN1O94822 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
LTN1O94822 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.8■■□□□ 1.88
LTN1O94822 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC26.8■■□□□ 1.88
LTN1O94822 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
LTN1O94822 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.8■■□□□ 1.88
LTN1O94822 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LTN1O94822 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.79■■□□□ 1.88
LTN1O94822 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC26.79■■□□□ 1.88
LTN1O94822 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC26.79■■□□□ 1.88
LTN1O94822 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LTN1O94822 GLDC-219ENST00000640208 420 ntTSL 2 BASIC26.79■■□□□ 1.88
LTN1O94822 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.79■■□□□ 1.88
LTN1O94822 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.79■■□□□ 1.88
LTN1O94822 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LTN1O94822 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26.79■■□□□ 1.88
LTN1O94822 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
LTN1O94822 KRT18P57-201ENST00000443599 1254 ntBASIC26.79■■□□□ 1.88
LTN1O94822 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC26.79■■□□□ 1.88
LTN1O94822 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LTN1O94822 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.78■■□□□ 1.88
LTN1O94822 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.78■■□□□ 1.88
LTN1O94822 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.78■■□□□ 1.88
LTN1O94822 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.78■■□□□ 1.88
LTN1O94822 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.78■■□□□ 1.88
LTN1O94822 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
LTN1O94822 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
LTN1O94822 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LTN1O94822 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.77■■□□□ 1.88
LTN1O94822 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC26.77■■□□□ 1.88
LTN1O94822 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC26.77■■□□□ 1.88
LTN1O94822 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
LTN1O94822 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.77■■□□□ 1.88
LTN1O94822 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LTN1O94822 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
LTN1O94822 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.77■■□□□ 1.88
LTN1O94822 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
LTN1O94822 EP400NL-214ENST00000641289 2402 ntBASIC26.77■■□□□ 1.88
LTN1O94822 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.76■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms