Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PFDN1O60925 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18■□□□□ 0.47
PFDN1O60925 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PFDN1O60925 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18■□□□□ 0.47
PFDN1O60925 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18■□□□□ 0.47
PFDN1O60925 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18■□□□□ 0.47
PFDN1O60925 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18■□□□□ 0.47
PFDN1O60925 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18■□□□□ 0.47
PFDN1O60925 CA15P2-201ENST00000611168 834 ntBASIC18■□□□□ 0.47
PFDN1O60925 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PFDN1O60925 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PFDN1O60925 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18■□□□□ 0.47
PFDN1O60925 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PFDN1O60925 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PFDN1O60925 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PFDN1O60925 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18■□□□□ 0.47
PFDN1O60925 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.99■□□□□ 0.47
PFDN1O60925 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.99■□□□□ 0.47
PFDN1O60925 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.99■□□□□ 0.47
PFDN1O60925 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.99■□□□□ 0.47
PFDN1O60925 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PFDN1O60925 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
PFDN1O60925 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.99■□□□□ 0.47
PFDN1O60925 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.99■□□□□ 0.47
PFDN1O60925 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN1O60925 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.98■□□□□ 0.47
PFDN1O60925 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PFDN1O60925 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PFDN1O60925 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PFDN1O60925 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.98■□□□□ 0.47
PFDN1O60925 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.98■□□□□ 0.47
PFDN1O60925 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.98■□□□□ 0.47
PFDN1O60925 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 MIR3960-201ENST00000583311 91 ntBASIC17.98■□□□□ 0.47
PFDN1O60925 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.98■□□□□ 0.47
PFDN1O60925 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PFDN1O60925 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PFDN1O60925 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.98■□□□□ 0.47
PFDN1O60925 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
PFDN1O60925 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.98■□□□□ 0.47
PFDN1O60925 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PFDN1O60925 AC046158.3-201ENST00000624947 2558 ntBASIC17.97■□□□□ 0.47
PFDN1O60925 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PFDN1O60925 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PFDN1O60925 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PFDN1O60925 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.97■□□□□ 0.47
PFDN1O60925 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PFDN1O60925 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms