Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TSPAN3O60637 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.72■□□□□ 0.91
TSPAN3O60637 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.71■□□□□ 0.91
TSPAN3O60637 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.71■□□□□ 0.91
TSPAN3O60637 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN3O60637 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN3O60637 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN3O60637 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.71■□□□□ 0.91
TSPAN3O60637 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN3O60637 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TSPAN3O60637 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.71■□□□□ 0.91
TSPAN3O60637 AC023632.3-201ENST00000521633 145 ntBASIC20.71■□□□□ 0.91
TSPAN3O60637 RN7SL471P-201ENST00000580476 299 ntBASIC20.71■□□□□ 0.91
TSPAN3O60637 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN3O60637 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN3O60637 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.71■□□□□ 0.91
TSPAN3O60637 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TSPAN3O60637 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
TSPAN3O60637 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TSPAN3O60637 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TSPAN3O60637 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.7■□□□□ 0.9
TSPAN3O60637 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.7■□□□□ 0.9
TSPAN3O60637 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TSPAN3O60637 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.7■□□□□ 0.9
TSPAN3O60637 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.7■□□□□ 0.9
TSPAN3O60637 AL359736.2-201ENST00000621992 437 ntBASIC20.7■□□□□ 0.9
TSPAN3O60637 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.7■□□□□ 0.9
TSPAN3O60637 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.7■□□□□ 0.9
TSPAN3O60637 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN3O60637 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TSPAN3O60637 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN3O60637 AC124283.5-201ENST00000624661 1809 ntBASIC20.69■□□□□ 0.9
TSPAN3O60637 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN3O60637 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TSPAN3O60637 PTBP1P-201ENST00000554374 1601 ntBASIC20.69■□□□□ 0.9
TSPAN3O60637 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN3O60637 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 RPPH1-201ENST00000516869 333 ntBASIC20.69■□□□□ 0.9
TSPAN3O60637 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN3O60637 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.69■□□□□ 0.9
TSPAN3O60637 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 AC092720.2-201ENST00000602388 1665 ntBASIC20.69■□□□□ 0.9
TSPAN3O60637 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TSPAN3O60637 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TSPAN3O60637 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.69■□□□□ 0.9
TSPAN3O60637 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.69■□□□□ 0.9
TSPAN3O60637 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN3O60637 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TSPAN3O60637 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.68■□□□□ 0.9
TSPAN3O60637 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.68■□□□□ 0.9
TSPAN3O60637 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.68■□□□□ 0.9
TSPAN3O60637 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.68■□□□□ 0.9
TSPAN3O60637 FAM197Y4-202ENST00000622692 608 ntBASIC20.68■□□□□ 0.9
TSPAN3O60637 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TSPAN3O60637 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TSPAN3O60637 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TSPAN3O60637 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN3O60637 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
TSPAN3O60637 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN3O60637 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN3O60637 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TSPAN3O60637 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TSPAN3O60637 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.67■□□□□ 0.9
TSPAN3O60637 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.67■□□□□ 0.9
TSPAN3O60637 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TSPAN3O60637 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN3O60637 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN3O60637 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN3O60637 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms