Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FOXD2O60548 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXD2O60548 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXD2O60548 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXD2O60548 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXD2O60548 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXD2O60548 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXD2O60548 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXD2O60548 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
FOXD2O60548 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXD2O60548 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXD2O60548 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXD2O60548 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXD2O60548 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
FOXD2O60548 AL157384.1-201ENST00000445995 2473 ntBASIC20.18■□□□□ 0.82
FOXD2O60548 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
FOXD2O60548 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
FOXD2O60548 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXD2O60548 AC139530.1-201ENST00000575312 1977 ntBASIC20.18■□□□□ 0.82
FOXD2O60548 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
FOXD2O60548 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 PGM5P4-201ENST00000421970 445 ntBASIC20.18■□□□□ 0.82
FOXD2O60548 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXD2O60548 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXD2O60548 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXD2O60548 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
FOXD2O60548 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXD2O60548 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXD2O60548 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXD2O60548 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXD2O60548 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXD2O60548 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXD2O60548 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXD2O60548 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXD2O60548 AC113347.1-201ENST00000413321 391 ntBASIC20.17■□□□□ 0.82
FOXD2O60548 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXD2O60548 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXD2O60548 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXD2O60548 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXD2O60548 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXD2O60548 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.17■□□□□ 0.82
FOXD2O60548 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
FOXD2O60548 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXD2O60548 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXD2O60548 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXD2O60548 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXD2O60548 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXD2O60548 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXD2O60548 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXD2O60548 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
FOXD2O60548 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
FOXD2O60548 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
FOXD2O60548 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.16■□□□□ 0.82
FOXD2O60548 MIR6786-201ENST00000616843 113 ntBASIC20.16■□□□□ 0.82
FOXD2O60548 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXD2O60548 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXD2O60548 AC092053.2-201ENST00000640557 1818 ntBASIC20.16■□□□□ 0.82
FOXD2O60548 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
FOXD2O60548 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
FOXD2O60548 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXD2O60548 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
FOXD2O60548 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXD2O60548 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXD2O60548 AF186192.3-201ENST00000583427 947 ntBASIC20.15■□□□□ 0.82
FOXD2O60548 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXD2O60548 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXD2O60548 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXD2O60548 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXD2O60548 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXD2O60548 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
FOXD2O60548 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXD2O60548 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXD2O60548 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXD2O60548 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXD2O60548 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXD2O60548 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXD2O60548 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXD2O60548 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXD2O60548 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms