Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM38O00635 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM38O00635 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM38O00635 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM38O00635 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM38O00635 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM38O00635 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM38O00635 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM38O00635 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM38O00635 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM38O00635 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TRIM38O00635 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM38O00635 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TRIM38O00635 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM38O00635 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 AC092368.3-202ENST00000574180 1591 ntBASIC20.15■□□□□ 0.82
TRIM38O00635 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM38O00635 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM38O00635 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRIM38O00635 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM38O00635 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM38O00635 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TRIM38O00635 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM38O00635 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM38O00635 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM38O00635 UBE2SP1-201ENST00000450587 669 ntBASIC20.14■□□□□ 0.81
TRIM38O00635 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.14■□□□□ 0.81
TRIM38O00635 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM38O00635 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM38O00635 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM38O00635 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRIM38O00635 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM38O00635 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM38O00635 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM38O00635 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM38O00635 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM38O00635 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM38O00635 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM38O00635 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.13■□□□□ 0.81
TRIM38O00635 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.13■□□□□ 0.81
TRIM38O00635 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM38O00635 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM38O00635 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRIM38O00635 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM38O00635 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM38O00635 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TRIM38O00635 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM38O00635 AC073314.1-201ENST00000568729 2216 ntBASIC20.12■□□□□ 0.81
TRIM38O00635 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM38O00635 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM38O00635 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM38O00635 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.12■□□□□ 0.81
TRIM38O00635 RPPH1-201ENST00000516869 333 ntBASIC20.12■□□□□ 0.81
TRIM38O00635 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM38O00635 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.12■□□□□ 0.81
TRIM38O00635 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM38O00635 AC233263.1-201ENST00000578059 224 ntBASIC20.12■□□□□ 0.81
TRIM38O00635 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM38O00635 AC006128.1-201ENST00000624704 1661 ntBASIC20.12■□□□□ 0.81
TRIM38O00635 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM38O00635 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM38O00635 CYP21A1P-202ENST00000354927 1481 ntBASIC20.11■□□□□ 0.81
TRIM38O00635 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM38O00635 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM38O00635 RNF165-205ENST00000588679 2904 ntBASIC20.11■□□□□ 0.81
TRIM38O00635 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM38O00635 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM38O00635 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
TRIM38O00635 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
TRIM38O00635 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TRIM38O00635 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms