Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 PTBP1P-201ENST00000554374 1601 ntBASIC21.35■■□□□ 1.01
RCCD1A6NED2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RCCD1A6NED2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RCCD1A6NED2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 UBE2DNL-204ENST00000602536 740 ntBASIC21.34■■□□□ 1.01
RCCD1A6NED2 AL356652.1-201ENST00000615962 565 ntBASIC21.34■■□□□ 1.01
RCCD1A6NED2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RCCD1A6NED2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.34■■□□□ 1.01
RCCD1A6NED2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RCCD1A6NED2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 AC087633.2-202ENST00000565166 1439 ntBASIC21.33■■□□□ 1.01
RCCD1A6NED2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RCCD1A6NED2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RCCD1A6NED2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RCCD1A6NED2 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.33■■□□□ 1.01
RCCD1A6NED2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RCCD1A6NED2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RCCD1A6NED2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
RCCD1A6NED2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RCCD1A6NED2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.33■■□□□ 1
RCCD1A6NED2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.33■■□□□ 1
RCCD1A6NED2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RCCD1A6NED2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.33■■□□□ 1
RCCD1A6NED2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.33■■□□□ 1
RCCD1A6NED2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.33■■□□□ 1
RCCD1A6NED2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.33■■□□□ 1
RCCD1A6NED2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.33■■□□□ 1
RCCD1A6NED2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.32■■□□□ 1
RCCD1A6NED2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.32■■□□□ 1
RCCD1A6NED2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
RCCD1A6NED2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.32■■□□□ 1
RCCD1A6NED2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.32■■□□□ 1
RCCD1A6NED2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.32■■□□□ 1
RCCD1A6NED2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.32■■□□□ 1
RCCD1A6NED2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.32■■□□□ 1
RCCD1A6NED2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RCCD1A6NED2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms