Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM49BA6NDI0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM49BA6NDI0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM49BA6NDI0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.14■■□□□ 1.14
TRIM49BA6NDI0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
TRIM49BA6NDI0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM49BA6NDI0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.14■■□□□ 1.14
TRIM49BA6NDI0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM49BA6NDI0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM49BA6NDI0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 AC004911.1-201ENST00000416316 871 ntBASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 AC092437.1-201ENST00000624794 1048 ntBASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM49BA6NDI0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 IKBKGP1-201ENST00000612193 1073 ntBASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 AC100791.3-201ENST00000617619 330 ntBASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 AC105020.6-201ENST00000621523 1217 ntBASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM49BA6NDI0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 AC231657.2-201ENST00000624556 255 ntBASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM49BA6NDI0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 AC007322.1-201ENST00000426983 750 ntBASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 AC093787.1-201ENST00000450396 207 ntBASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 CYP2T3P-201ENST00000601990 817 ntBASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
TRIM49BA6NDI0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 KRT18P68-201ENST00000392293 1000 ntBASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.1■■□□□ 1.13
TRIM49BA6NDI0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms