Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
TCRBV3S1A0A5B6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TCRBV3S1A0A5B6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
TCRBV3S1A0A5B6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV3S1A0A5B6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.77■□□□□ 0.59
TCRBV3S1A0A5B6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TCRBV3S1A0A5B6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV3S1A0A5B6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.77■□□□□ 0.59
TCRBV3S1A0A5B6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms