Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-5A0A0J9YX44 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
TRBV5-5A0A0J9YX44 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 AC087633.2-202ENST00000565166 1439 ntBASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 PGM5P4-201ENST00000421970 445 ntBASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 AL356652.1-201ENST00000615962 565 ntBASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-5A0A0J9YX44 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 AC142381.2-201ENST00000566120 298 ntBASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 TERF1P2-201ENST00000583350 1212 ntBASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRBV5-5A0A0J9YX44 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 AC004408.2-201ENST00000623613 2777 ntBASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 AC123595.1-201ENST00000440769 1046 ntBASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-5A0A0J9YX44 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.39■□□□□ 0.38
TRBV5-5A0A0J9YX44 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 AL139246.5-201ENST00000606645 996 ntBASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV5-5A0A0J9YX44 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms