Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 AC133681.1-201ENST00000465482 601 ntBASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 RNF165-205ENST00000588679 2904 ntBASIC14.18□□□□□ -0.14
TRAV10A0A0B4J240 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 KRASP1-201ENST00000407852 552 ntBASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 AP001412.1-201ENST00000608405 714 ntBASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 AC124016.1-201ENST00000609552 612 ntBASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 AC110285.5-201ENST00000611501 352 ntBASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV10A0A0B4J240 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 AL135905.2-201ENST00000584934 1404 ntBASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 AL596275.1-201ENST00000423464 877 ntBASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRAV10A0A0B4J240 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms